BLASTX nr result

ID: Bupleurum21_contig00034630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034630
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helia...   109   4e-22
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...   102   5e-20
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    99   5e-19
ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    98   1e-18
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    80   2e-13

>gb|ACY69610.1| TIR-NBS-LRR resistance-like protein RGC151 [Helianthus annuus]
          Length = 1021

 Score =  109 bits (273), Expect = 4e-22
 Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 5/210 (2%)
 Frame = -1

Query: 629  RLKLLETLIISGCSNLGMLPVEMRTMESM*SFRADGLDFGNSSNTIQEKEXXXXXXXXXX 450
            +LK L  L++ GCSNLG  P EM+ MES+ +   +    G+SS+T+  +           
Sbjct: 763  KLKSLTQLLVDGCSNLGEYPAEMKEMESLEADNVNMKSHGSSSSTMVPRT---------- 812

Query: 449  XXXXXSPQLSLRCLPCKSLTRLSLSNCNVHDDAFPMNLSFGPLLEYLDLSGNPIRFLPDC 270
                  P+     LP +SL  LSL NCN+++++FPM+ S  P+L+ L L GNP+  +PDC
Sbjct: 813  ------PESFASSLP-RSLVTLSLKNCNLYNESFPMDFSNLPMLKKLYLDGNPMDSMPDC 865

Query: 269  FKGVRRIECLYLMKCNKLQALENLP-NIKRLRVLYCPLLEKITIQPVIRFESFAYPWE-C 96
             K + R+E L    C  L+ +   P  +K+L +L+C  LEK T  P    E  A P   C
Sbjct: 866  VKSLSRLETLSFCWCRNLKTVLCAPIQLKQLDILFCDSLEKTTFHP----EKSAIPRVLC 921

Query: 95   RK---LVEMETVFKVVPIEKVDLELINECG 15
             +   L E++ + K+  + ++D E++   G
Sbjct: 922  NRSVTLTEIQHILKIQALSEIDEEVLCSLG 951


>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score =  102 bits (255), Expect = 5e-20
 Identities = 69/201 (34%), Positives = 108/201 (53%), Gaps = 1/201 (0%)
 Frame = -1

Query: 626 LKLLETLIISGCSNLGMLPVEMRTMESM*SFRADGLDFGNSSNTIQEKEXXXXXXXXXXX 447
           LK L+ LI+SGCS L  LP E+RT++ +   RAD      S N +Q  +           
Sbjct: 49  LKSLDKLILSGCSKLDELPEELRTLQCLRVLRADE----TSINRLQSWQLNWWSWLFPRR 104

Query: 446 XXXXSPQLSLRCLPCKSLTRLSLSNCNVHDDAFPMNLSFGPLLEYLDLSGNPIRFLPDCF 267
               +   S   LPC SL +LSL++CN+ DD  P +LS  P LE+L+LS NPI+ LP+  
Sbjct: 105 SLQST-SFSFTFLPC-SLVKLSLADCNITDDVIPDDLSSLPALEHLNLSKNPIQTLPESM 162

Query: 266 KGVRRIECLYLMKCNKLQALENLP-NIKRLRVLYCPLLEKITIQPVIRFESFAYPWECRK 90
             +  ++ L L  C  L++L  LP ++K+LR   C  LE+I   P +          C++
Sbjct: 163 NSLSMLQDLLLNHCRSLRSLPELPTSLKKLRAEKCTKLERIANLPNLLRSLRLNLIGCKR 222

Query: 89  LVEMETVFKVVPIEKVDLELI 27
           LV+++ +F +  + + D ++I
Sbjct: 223 LVQVQGLFNLEMMREFDAKMI 243


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 99.4 bits (246), Expect = 5e-19
 Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
 Frame = -1

Query: 626  LKLLETLIISGCSNLGMLPVEMRTMESM*SFRADGLDFGNSSNTIQEK------EXXXXX 465
            L  LE LI+SGC NL  LP ++  ++S+     DG+   N  N+I E             
Sbjct: 739  LHSLEELILSGCLNLVELPKDLENLQSLRVLHLDGIPM-NQVNSITEDFKELSLSLQHLT 797

Query: 464  XXXXXXXXXXSPQLSLRCLPCKSLTRLSLSNCNVHDDAFPMNLSFGPLLEYLDLSGNPIR 285
                        + SL  LP + L  LSL++C + D+  P +LS  P LEYL+LSGNP R
Sbjct: 798  SRSWLLQRWAKSRFSLSSLP-RFLVSLSLADCCLSDNVIPGDLSCLPSLEYLNLSGNPFR 856

Query: 284  FLPDCFKGVRRIECLYLMKCNKLQALENLP-NIKRLRVLYCPLLEKITIQPVIRFESFAY 108
            FLP+    +  +  L L +C  L+++  LP ++  L+   C  LE+IT  P +       
Sbjct: 857  FLPESINSLGMLHSLVLDRCISLKSIPELPTDLNSLKAEDCTSLERITNLPNLLKSLNLE 916

Query: 107  PWECRKLVEMETVFKVVPIEKVDLELINECGI 12
             + C  LVE++ +FK+ P+  ++ +++   G+
Sbjct: 917  IFGCDSLVEVQGLFKLEPVGNINTQILKSVGL 948


>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 72/206 (34%), Positives = 101/206 (49%), Gaps = 1/206 (0%)
 Frame = -1

Query: 626  LKLLETLIISGCSNLGMLPVEMRTMESM*SFRADGLDFGNSSNTIQEKEXXXXXXXXXXX 447
            L+ LE LI+SGCS L  L  E+R MES+     DG     +      K            
Sbjct: 741  LRSLEKLILSGCSELDKLSSELRKMESLKVLHMDGFKHYTA------KSRQLTFWSWLSR 794

Query: 446  XXXXSPQLSLRCLPCKSLTRLSLSNCNVHDDAFPMNLSFGPLLEYLDLSGNPIRFLPDCF 267
                   L+L  LPC SL  LSL++C++ DD   ++LS    L+ L+LSGN I  LP   
Sbjct: 795  RQGMDSSLALTFLPC-SLDHLSLADCDLSDDT--VDLSCLSSLKCLNLSGNSISCLPKTI 851

Query: 266  KGVRRIECLYLMKCNKLQALENLP-NIKRLRVLYCPLLEKITIQPVIRFESFAYPWECRK 90
             G+ ++E L L  C  LQ+L  LP +++ L    C  LE+IT  P +          C +
Sbjct: 852  SGLTKLESLVLDNCRSLQSLSELPASLRELNAENCTSLERITNLPNLMTSLRLNLAGCEQ 911

Query: 89   LVEMETVFKVVPIEKVDLELINECGI 12
            LVE++  FK+ PI   D E+ N  G+
Sbjct: 912  LVEVQGFFKLEPINNHDKEMANMLGL 937


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
 Frame = -1

Query: 626  LKLLETLIISGCSNLGMLPVEMRTMESM*SFRADGLDFGNSSNTIQEKEXXXXXXXXXXX 447
            L+ LE L + GCS L  LP EMR M+S+    AD                          
Sbjct: 703  LESLEKLNLCGCSKLDQLPEEMRKMQSLKVLYAD-------------------------- 736

Query: 446  XXXXSPQLSLRCLPCKSLTRLSLSNCNVHDDAFPMNLSFGPLLEYLDLSGNPIRFLPDCF 267
                                   ++CN+ D A P +L     LE LDL GNPI  +P+  
Sbjct: 737  -----------------------ADCNLSDVAIPNDLRCLRSLESLDLKGNPIYSIPESI 773

Query: 266  KGVRRIECLYLMKCNKLQALENLP-NIKRLRVLYCPLLEKITIQPVIRFESFAYPWECRK 90
              +  ++ L L KC +LQ+L  LP +++ L+   C  LE+IT  P +        + C +
Sbjct: 774  NSLTTLQYLCLDKCTRLQSLPQLPTSLEELKAEGCTSLERITNLPNLLSTLQVELFGCGQ 833

Query: 89   LVEMETVFKVVPIEKVDLELINECGI 12
            LVE++ +FK+ P   +D+E++N  G+
Sbjct: 834  LVEVQGLFKLEPTINMDIEMMNGLGL 859


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