BLASTX nr result

ID: Bupleurum21_contig00034624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034624
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P0CC99.1|NU2C2_TOBAC RecName: Full=NAD(P)H-quinone oxidoreduc...   217   9e-55
ref|YP_005088850.1| NADH dehydrogenase subunit 2 (chloroplast) [...   214   4e-54
sp|P0CC32.1|NU2C1_ARATH RecName: Full=NAD(P)H-quinone oxidoreduc...   214   4e-54
sp|P0CD19.1|NU2C2_ORYSA RecName: Full=NAD(P)H-quinone oxidoreduc...   214   8e-54
sp|P0CC73.1|NU2C2_HORVU RecName: Full=NAD(P)H-quinone oxidoreduc...   214   8e-54

>sp|P0CC99.1|NU2C2_TOBAC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288561983|sp|P0CC98.1|NU2C1_TOBAC RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
          Length = 510

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = -1

Query: 327 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 148
           ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV
Sbjct: 179 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 238

Query: 147 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 1
           GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP
Sbjct: 239 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 287


>ref|YP_005088850.1| NADH dehydrogenase subunit 2 (chloroplast) [Millettia pinnata]
           gi|374249595|ref|YP_005088865.1| NADH dehydrogenase
           subunit 2 (chloroplast) [Millettia pinnata]
           gi|356474869|gb|AET11387.1| NADH dehydrogenase subunit 2
           (chloroplast) [Millettia pinnata]
           gi|356474884|gb|AET11401.1| NADH dehydrogenase subunit 2
           (chloroplast) [Millettia pinnata]
          Length = 510

 Score =  214 bits (546), Expect = 4e-54
 Identities = 108/109 (99%), Positives = 108/109 (99%)
 Frame = -1

Query: 327 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 148
           ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGI IALIFITV
Sbjct: 179 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGILIALIFITV 238

Query: 147 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 1
           GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP
Sbjct: 239 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 287


>sp|P0CC32.1|NU2C1_ARATH RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
           gi|288561992|sp|P0CC33.1|NU2C2_ARATH RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
          Length = 512

 Score =  214 bits (546), Expect = 4e-54
 Identities = 108/109 (99%), Positives = 108/109 (99%)
 Frame = -1

Query: 327 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 148
           ATMKYLLMGGASSSILVYGFSWLYG SGGEIELQEIVNGLINTQMYNSPGISIALIFITV
Sbjct: 179 ATMKYLLMGGASSSILVYGFSWLYGSSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 238

Query: 147 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 1
           GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP
Sbjct: 239 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 287


>sp|P0CD19.1|NU2C2_ORYSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288558972|sp|P0CD21.1|NU2C2_ORYSI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288558973|sp|P0CD23.1|NU2C2_ORYSJ RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288561964|sp|P0CD18.1|NU2C1_ORYSA RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
           gi|288561965|sp|P0CD20.1|NU2C1_ORYSI RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
           gi|288561966|sp|P0CD22.1|NU2C1_ORYSJ RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
          Length = 510

 Score =  214 bits (544), Expect = 8e-54
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = -1

Query: 327 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 148
           ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV
Sbjct: 179 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 238

Query: 147 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 1
           G+GFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRI DIP
Sbjct: 239 GLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRILDIP 287


>sp|P0CC73.1|NU2C2_HORVU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 2 B,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 B; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 B
           gi|288561941|sp|P0CC72.1|NU2C1_HORVU RecName:
           Full=NAD(P)H-quinone oxidoreductase subunit 2 A,
           chloroplastic; AltName: Full=NAD(P)H dehydrogenase,
           subunit 2 A; AltName: Full=NADH-plastoquinone
           oxidoreductase subunit 2 A
          Length = 510

 Score =  214 bits (544), Expect = 8e-54
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = -1

Query: 327 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 148
           ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV
Sbjct: 179 ATMKYLLMGGASSSILVYGFSWLYGLSGGEIELQEIVNGLINTQMYNSPGISIALIFITV 238

Query: 147 GIGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRIFDIP 1
           G+GFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRI DIP
Sbjct: 239 GLGFKLSLAPFHQWTPDVYEGSPTPVVAFLSVTSKVAALALATRILDIP 287


Top