BLASTX nr result

ID: Bupleurum21_contig00034616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034616
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155374.1| PREDICTED: uncharacterized protein LOC101225...    66   1e-08
ref|XP_004135428.1| PREDICTED: uncharacterized protein LOC101218...    66   1e-08
gb|AAX55105.1| hypothetical protein At2g03810 [Arabidopsis thali...    60   1e-06
ref|NP_178475.2| 18S pre-ribosomal assembly protein gar2-related...    60   1e-06
gb|AAD24815.1| hypothetical protein [Arabidopsis thaliana] gi|20...    60   1e-06

>ref|XP_004155374.1| PREDICTED: uncharacterized protein LOC101225209 [Cucumis sativus]
          Length = 409

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 40/322 (12%)
 Frame = +2

Query: 20  ELKDNKGYTKNPGHGFDAD------------------VDDFN-INKREAKVSVAAGRVHT 142
           +L+D K +T N     DAD                  +DDFN  +  +A VS        
Sbjct: 2   KLEDQKEFTNNLKGNVDADHNNTDADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCKA 61

Query: 143 EMSHKDSKPYADGMFLESDLPELIVRYKDGIFHAVKDICVDDGTLIENKSLIENVGSGGS 322
           ++S +DS+ Y +   +E  LPELIV YK+ I + VKDIC+DDGT  +           GS
Sbjct: 62  DLSEEDSELYMEKSVVECQLPELIVCYKENICNIVKDICIDDGTPRDKLFC-------GS 114

Query: 323 TLPSSTYKDI-DVLEEANTENLYEDGLKSLSDKDCGADVAADCTHKSEANFNKDTATDSD 499
           +L     KD+  +L    T++  ++ +  L  +D     A+D +  SE+  +KD+  + D
Sbjct: 115 SLDE---KDVCSILPP--TKDWKDESVGELKQRDM---FASDDSEHSESFGSKDSPNEYD 166

Query: 500 AAGLGSSPESD-KYQYISGVCSPETPIQTGDEK---CNAIE---MTKEIGCDSTNLCKDL 658
           +  L  +PE++    Y +    P T + T   K    N I+    ++++  ++T  C ++
Sbjct: 167 SKDLAITPEAEYDVAYFTDNDMPMTDLVTESLKPLTNNEIKPHPQSEQVFIETT--CSEV 224

Query: 659 -------------RRKTSLKRLLDSSKCSETDSSQNANEISNVQCSLTTEELNRSSYLNN 799
                         R+ + + +  +      DS+   +  ++V C  TT         +N
Sbjct: 225 PVLVRVAEESFSNTREATSESITSAEDPKHGDSANAPSTSASVGCKETTS--------SN 276

Query: 800 QLPSADLESANINFNVNSPKVV 865
            L SAD   A  +   ++PK V
Sbjct: 277 PLASADKCEAECHTTSSNPKHV 298


>ref|XP_004135428.1| PREDICTED: uncharacterized protein LOC101218906 [Cucumis sativus]
          Length = 443

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 40/322 (12%)
 Frame = +2

Query: 20  ELKDNKGYTKNPGHGFDAD------------------VDDFN-INKREAKVSVAAGRVHT 142
           +L+D K +T N     DAD                  +DDFN  +  +A VS        
Sbjct: 36  KLEDQKEFTNNLKGNVDADHNNTDADGWVAKKRECLDLDDFNDYDDVKAFVSPLNNSCKA 95

Query: 143 EMSHKDSKPYADGMFLESDLPELIVRYKDGIFHAVKDICVDDGTLIENKSLIENVGSGGS 322
           ++S +DS+ Y +   +E  LPELIV YK+ I + VKDIC+DDGT  +           GS
Sbjct: 96  DLSEEDSELYMEKSVVECQLPELIVCYKENICNIVKDICIDDGTPRDKLFC-------GS 148

Query: 323 TLPSSTYKDI-DVLEEANTENLYEDGLKSLSDKDCGADVAADCTHKSEANFNKDTATDSD 499
           +L     KD+  +L    T++  ++ +  L  +D     A+D +  SE+  +KD+  + D
Sbjct: 149 SLDE---KDVCSILPP--TKDWKDESVGELKQRDM---FASDDSEHSESFGSKDSPNEYD 200

Query: 500 AAGLGSSPESD-KYQYISGVCSPETPIQTGDEK---CNAIE---MTKEIGCDSTNLCKDL 658
           +  L  +PE++    Y +    P T + T   K    N I+    ++++  ++T  C ++
Sbjct: 201 SKDLAITPEAEYDVAYFTDNDMPMTDLVTESLKPLTNNEIKPHPQSEQVFIETT--CSEV 258

Query: 659 -------------RRKTSLKRLLDSSKCSETDSSQNANEISNVQCSLTTEELNRSSYLNN 799
                         R+ + + +  +      DS+   +  ++V C  TT         +N
Sbjct: 259 PVLVRVAEESFSNTREATSESITSAEDPKHGDSANAPSTSASVGCKETTS--------SN 310

Query: 800 QLPSADLESANINFNVNSPKVV 865
            L SAD   A  +   ++PK V
Sbjct: 311 PLASADKCEAECHTTSSNPKHV 332


>gb|AAX55105.1| hypothetical protein At2g03810 [Arabidopsis thaliana]
          Length = 439

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +2

Query: 155 KDSKPYADGMFLESDLPELIVRYKDGIFHAVKDICVDDGTLIENKSLIENVGSGGSTLPS 334
           KD   Y D      DLPE++V YK+  +H VKDICVD+G  ++ K L    G   S   S
Sbjct: 85  KDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLF---GEKDSVKSS 141

Query: 335 STYKDIDVLEEANTENLYEDGLKSLSDKDCGADVAADCT-HKSEANFNKDTATD-SDAAG 508
           ST    + L +A+  N+     KS  D     D +  C  HK++ +  + +  D +DA G
Sbjct: 142 ST----EDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEG 197

Query: 509 LGSS 520
             S+
Sbjct: 198 TSSN 201


>ref|NP_178475.2| 18S pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|42570677|ref|NP_973412.1| 18S
           pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|79316683|ref|NP_001030966.1|
           18S pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|186499149|ref|NP_001118260.1|
           18S pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|330250656|gb|AEC05750.1| 18S
           pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|330250657|gb|AEC05751.1| 18S
           pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|330250658|gb|AEC05752.1| 18S
           pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana] gi|330250659|gb|AEC05753.1| 18S
           pre-ribosomal assembly protein gar2-related protein
           [Arabidopsis thaliana]
          Length = 439

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +2

Query: 155 KDSKPYADGMFLESDLPELIVRYKDGIFHAVKDICVDDGTLIENKSLIENVGSGGSTLPS 334
           KD   Y D      DLPE++V YK+  +H VKDICVD+G  ++ K L    G   S   S
Sbjct: 85  KDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLF---GEKDSVKSS 141

Query: 335 STYKDIDVLEEANTENLYEDGLKSLSDKDCGADVAADCT-HKSEANFNKDTATD-SDAAG 508
           ST    + L +A+  N+     KS  D     D +  C  HK++ +  + +  D +DA G
Sbjct: 142 ST----EDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEG 197

Query: 509 LGSS 520
             S+
Sbjct: 198 TSSN 201


>gb|AAD24815.1| hypothetical protein [Arabidopsis thaliana]
           gi|20197901|gb|AAM15306.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 431

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +2

Query: 155 KDSKPYADGMFLESDLPELIVRYKDGIFHAVKDICVDDGTLIENKSLIENVGSGGSTLPS 334
           KD   Y D      DLPE++V YK+  +H VKDICVD+G  ++ K L    G   S   S
Sbjct: 95  KDPVFYMDKNVTACDLPEIVVCYKENTYHIVKDICVDEGVPVQEKFLF---GEKDSVKSS 151

Query: 335 STYKDIDVLEEANTENLYEDGLKSLSDKDCGADVAADCT-HKSEANFNKDTATD-SDAAG 508
           ST    + L +A+  N+     KS  D     D +  C  HK++ +  + +  D +DA G
Sbjct: 152 ST----EDLMKADKTNVNPSETKSAEDSISKVDDSEFCNDHKTDRDVEESSGEDFADAEG 207

Query: 509 LGSS 520
             S+
Sbjct: 208 TSSN 211


Top