BLASTX nr result

ID: Bupleurum21_contig00034592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034592
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298954.1| cc-nbs-lrr resistance protein [Populus trich...    88   8e-16
ref|XP_002522964.1| Disease resistance protein RGA2, putative [R...    86   4e-15
ref|XP_004148117.1| PREDICTED: disease resistance protein At4g27...    85   7e-15
ref|XP_003613421.1| Disease resistance protein [Medicago truncat...    84   9e-15
gb|AFC90319.1| nucleotide-binding site leucine-rich repeat prote...    84   2e-14

>ref|XP_002298954.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222846212|gb|EEE83759.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 199

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/122 (40%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   PFGDDDIRSKGCKILFTSREKKVCLDNNCIDPVEITALTDVESWKMFKNAVGAGDIDSLH 182
           PFGDD    +GCKIL T+R +++C    C   V ++ LT++E+W +FK+  G  D DS  
Sbjct: 12  PFGDDH---RGCKILLTTRNQELCSYLACQQKVLLSPLTEIEAWALFKSNAGLSDEDSDL 68

Query: 183 DEYLAKQVCKKCAGIPLIIIAVGKALKFMDRNLWSDALVQLENSKIESVPGI--TPEVYA 356
           +  +AK+V KKC G+PL + AVG+ALK   +N W  A   L+ S+   +  +      YA
Sbjct: 69  NR-VAKKVAKKCQGLPLALAAVGRALKGKSKNEWKFASKNLKKSQSRHMENVDDRSNPYA 127

Query: 357 CL 362
           CL
Sbjct: 128 CL 129


>ref|XP_002522964.1| Disease resistance protein RGA2, putative [Ricinus communis]
           gi|223537776|gb|EEF39394.1| Disease resistance protein
           RGA2, putative [Ricinus communis]
          Length = 1114

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 47/122 (38%), Positives = 72/122 (59%), Gaps = 2/122 (1%)
 Frame = +3

Query: 3   PFGDDDIRSKGCKILFTSREKKVCLDNNCIDPVEITALTDVESWKMFKNAVGAGDIDSLH 182
           P GDD    KGCKIL T+R ++VC   NC   + +  LT+ E+W +FKN  G  D  S  
Sbjct: 278 PHGDDH---KGCKILLTTRLRRVCASLNCQRDIPLHVLTESEAWALFKNIAGLHDCSSDL 334

Query: 183 DEYLAKQVCKKCAGIPLIIIAVGKALKFMDRNLWSDALVQLENSKIESVPGITPE--VYA 356
           +  +A +V +KC G+PL I+ VG+AL+    + W  AL +L++S++  +  +  +   YA
Sbjct: 335 NN-VAVKVVRKCKGLPLAIVTVGRALRDKSFSGWKVALQKLKSSRLIDIRDVDKDKNAYA 393

Query: 357 CL 362
           CL
Sbjct: 394 CL 395


>ref|XP_004148117.1| PREDICTED: disease resistance protein At4g27190-like, partial
           [Cucumis sativus]
          Length = 952

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
 Frame = +3

Query: 33  GCKILFTSREKKVCLDN-NCIDPVEITALTDVESWKMFKNAVGAGDIDSLHDEYLAKQVC 209
           GCK+L TSR + +  +N N  +  ++++L++ ESWK F   +G    D+++ + +AK V 
Sbjct: 268 GCKVLITSRSQDILTNNMNTQECFQVSSLSEEESWKFFMAIIG-DKFDTIYKKNIAKNVA 326

Query: 210 KKCAGIPLIIIAVGKALKFMDRNLWSDALVQLENSKIESVPGITPEVYACL 362
           K+C G+PL +  + KALK  D + W DAL +L NS    + G++ +VYA L
Sbjct: 327 KECGGLPLALDTIAKALKGKDMHHWEDALTKLRNSIGMDIKGVSDKVYASL 377


>ref|XP_003613421.1| Disease resistance protein [Medicago truncatula]
           gi|355514756|gb|AES96379.1| Disease resistance protein
           [Medicago truncatula]
          Length = 1997

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 1/102 (0%)
 Frame = +3

Query: 24  RSKGCKILFTSREKKVCLDNNCIDPVEITALTDVESWKMFKNAVGAGDIDSLHD-EYLAK 200
           R K CKILFTSR++KVC +  C    ++  L++ E+W +F+    AGD+ + HD   +A+
Sbjct: 322 RDKYCKILFTSRDQKVCQNMGCRVNFQVPVLSEDEAWSLFQEM--AGDVVNKHDINPIAR 379

Query: 201 QVCKKCAGIPLIIIAVGKALKFMDRNLWSDALVQLENSKIES 326
           +V K C G+PL I+ VG+AL    ++ W D L QL N +  S
Sbjct: 380 EVAKACGGLPLAIVTVGRALSIEGKSAWEDTLKQLRNFQSSS 421


>gb|AFC90319.1| nucleotide-binding site leucine-rich repeat protein, partial
           [Rhododendron rubropunctatum]
          Length = 268

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
 Frame = +3

Query: 27  SKGCKILFTSREKKVCLDNNCIDPVEITALTDVESWKMFKNAVG--AGDIDSLHDEYLAK 200
           +KGCK++ TSR + V +D +      I  L++ E+W +FK  +G      D LHD  +AK
Sbjct: 86  NKGCKVVLTSRNQHVLIDMDAHKDFPIQVLSEEEAWNLFKKKMGNNVDSHDQLHD--IAK 143

Query: 201 QVCKKCAGIPLIIIAVGKALKFMDRNLWSDALVQLENSKIESVPGITPEVYACL 362
            VC++C G+P+ I+AVG ALK    + W  +L +L+ S +  +  I P+++  L
Sbjct: 144 AVCRECRGLPVAILAVGAALKGKSMSAWKSSLDKLQKSMLNKIEDIDPKLFTSL 197


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