BLASTX nr result

ID: Bupleurum21_contig00034590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034590
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25602.3| unnamed protein product [Vitis vinifera]               54   2e-12
ref|XP_004159402.1| PREDICTED: transmembrane 9 superfamily membe...    50   5e-12
ref|XP_004139399.1| PREDICTED: transmembrane 9 superfamily membe...    50   5e-12
ref|XP_002523542.1| Endosomal P24A protein precursor, putative [...    52   1e-11
ref|XP_003609518.1| Transmembrane 9 superfamily protein member, ...    57   1e-11

>emb|CBI25602.3| unnamed protein product [Vitis vinifera]
          Length = 545

 Score = 53.9 bits (128), Expect(2) = 2e-12
 Identities = 40/104 (38%), Positives = 50/104 (48%), Gaps = 31/104 (29%)
 Frame = +2

Query: 2   TNQTEIFLFKSSPLSGDQFKVLN------------LDNLPAITYMKR--IILFYDG*EMG 139
           TN+T+IFL KS PLS D FK+L             LDNLPAI Y K+    L + G  +G
Sbjct: 97  TNETQIFLCKSDPLSADDFKILKKRIDEMYQVNLILDNLPAIRYTKKEGFFLRWTGYPVG 156

Query: 140 -----------------LMKKVAKDILSGYMIVGFEVVLCG*FH 220
                            L+ K +   + GYM+VGFEVV C   H
Sbjct: 157 IKVQDMYYVFNHLKFTVLVHKTSN--VPGYMVVGFEVVPCSVSH 198



 Score = 43.1 bits (100), Expect(2) = 2e-12
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +3

Query: 249 HDVKLVDKLKMYERYTAPMKCDPATVSLPRKEGQPVAF 362
           H+   V  LK+Y++Y + + CDP TV +  KEGQP+ F
Sbjct: 198 HNFDSVKNLKIYDKYPSAINCDPTTVEMAVKEGQPMVF 235


>ref|XP_004159402.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis
           sativus]
          Length = 662

 Score = 50.1 bits (118), Expect(2) = 5e-12
 Identities = 20/38 (52%), Positives = 28/38 (73%)
 Frame = +3

Query: 249 HDVKLVDKLKMYERYTAPMKCDPATVSLPRKEGQPVAF 362
           H+V+ V  L MY+ Y + ++CDP TVS+P KEGQP+ F
Sbjct: 228 HNVEQVKNLNMYQTYPSSIQCDPTTVSMPIKEGQPIVF 265



 Score = 45.4 bits (106), Expect(2) = 5e-12
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 54/127 (42%)
 Frame = +2

Query: 2   TNQTEIFLFKSSPLSGDQFKVLN------------LDNLPAITYMKR--IILFYDG*EMG 139
           TNQT+IF+  S PL+ DQFK++             LDNLPAI Y ++   +L + G  +G
Sbjct: 102 TNQTDIFMCSSDPLTSDQFKIMKERIDEMYQVNLILDNLPAIRYTQKEGYVLRWTGYPVG 161

Query: 140 LMKKVAKDILS----------------------------------------GYMIVGFEV 199
           +  K A  + +                                        GYM+VGFEV
Sbjct: 162 VKVKDAYYVFNHLKFKVLVHKYEEANMARVMGTGDAAELIPTIGKEGSDVPGYMVVGFEV 221

Query: 200 VLCG*FH 220
           V C   H
Sbjct: 222 VPCSIVH 228


>ref|XP_004139399.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis
           sativus]
          Length = 471

 Score = 50.1 bits (118), Expect(2) = 5e-12
 Identities = 20/38 (52%), Positives = 28/38 (73%)
 Frame = +3

Query: 249 HDVKLVDKLKMYERYTAPMKCDPATVSLPRKEGQPVAF 362
           H+V+ V  L MY+ Y + ++CDP TVS+P KEGQP+ F
Sbjct: 228 HNVEQVKNLNMYQTYPSSIQCDPTTVSMPIKEGQPIVF 265



 Score = 45.4 bits (106), Expect(2) = 5e-12
 Identities = 37/127 (29%), Positives = 51/127 (40%), Gaps = 54/127 (42%)
 Frame = +2

Query: 2   TNQTEIFLFKSSPLSGDQFKVLN------------LDNLPAITYMKR--IILFYDG*EMG 139
           TNQT+IF+  S PL+ DQFK++             LDNLPAI Y ++   +L + G  +G
Sbjct: 102 TNQTDIFMCSSDPLTSDQFKIMKERIDEMYQVNLILDNLPAIRYTQKEGYVLRWTGYPVG 161

Query: 140 LMKKVAKDILS----------------------------------------GYMIVGFEV 199
           +  K A  + +                                        GYM+VGFEV
Sbjct: 162 VKVKDAYYVFNHLKFKVLVHKYEEANMARVMGTGDAAELIPTIGKEGSDVPGYMVVGFEV 221

Query: 200 VLCG*FH 220
           V C   H
Sbjct: 222 VPCSIVH 228


>ref|XP_002523542.1| Endosomal P24A protein precursor, putative [Ricinus communis]
           gi|223537249|gb|EEF38881.1| Endosomal P24A protein
           precursor, putative [Ricinus communis]
          Length = 657

 Score = 51.6 bits (122), Expect(2) = 1e-11
 Identities = 21/38 (55%), Positives = 28/38 (73%)
 Frame = +3

Query: 249 HDVKLVDKLKMYERYTAPMKCDPATVSLPRKEGQPVAF 362
           H+V+ V   KMYE+Y A +KCDP TVS+P KE +P+ F
Sbjct: 223 HNVQSVKNTKMYEKYPAQIKCDPTTVSMPIKENEPIVF 260



 Score = 42.7 bits (99), Expect(2) = 1e-11
 Identities = 36/126 (28%), Positives = 50/126 (39%), Gaps = 54/126 (42%)
 Frame = +2

Query: 5   NQTEIFLFKSSPLSGDQFKVLN------------LDNLPAITYMKR--IILFYDG*EMGL 142
           N++E+FL K+ PLS D FK+L             LDNLPAI Y K+   +L + G  +G+
Sbjct: 98  NESEVFLCKTDPLSADSFKLLKKRIDEMYQVNLILDNLPAIRYTKKESYLLRWTGFPVGI 157

Query: 143 MKKVAKDILS----------------------------------------GYMIVGFEVV 202
             + A  + +                                        GYM+VGFEVV
Sbjct: 158 KVQDAYYVFNHLRFTVLVHKYEEANVARVMGTGDGAEVIPTIGNGGSDIPGYMVVGFEVV 217

Query: 203 LCG*FH 220
            C   H
Sbjct: 218 PCNVMH 223


>ref|XP_003609518.1| Transmembrane 9 superfamily protein member, partial [Medicago
           truncatula] gi|355510573|gb|AES91715.1| Transmembrane 9
           superfamily protein member, partial [Medicago
           truncatula]
          Length = 362

 Score = 57.0 bits (136), Expect(2) = 1e-11
 Identities = 23/38 (60%), Positives = 31/38 (81%)
 Frame = +3

Query: 249 HDVKLVDKLKMYERYTAPMKCDPATVSLPRKEGQPVAF 362
           H+   V  LKMYE+Y +P+KCDP+TV++P KEGQP+AF
Sbjct: 222 HNANSVKNLKMYEKYPSPIKCDPSTVAMPIKEGQPLAF 259



 Score = 37.4 bits (85), Expect(2) = 1e-11
 Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 53/126 (42%)
 Frame = +2

Query: 2   TNQTEIFLFKSSPLSGDQFKVLN------------LDNLPAITYMKR--IILFYDG*EMG 139
           TN++E+FL +   LS DQFK+L             LDNLPAI + K+    L + G  +G
Sbjct: 97  TNESEVFLCQVDKLSDDQFKILKKRIDEMYQVNLILDNLPAIRFTKKDEYFLRWTGYPVG 156

Query: 140 --------LMKKVAKDIL-------------------------------SGYMIVGFEVV 202
                   L   +  ++L                                GYM+VGFEV+
Sbjct: 157 IKIQDVYYLFNHLRFNVLVHKYEETNVARVMGTGDAAEMIPPVKEGSEKPGYMVVGFEVI 216

Query: 203 LCG*FH 220
            C   H
Sbjct: 217 PCSIMH 222


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