BLASTX nr result

ID: Bupleurum21_contig00034583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034583
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27257.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002512116.1| DNA binding protein, putative [Ricinus commu...    55   8e-06

>emb|CBI27257.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
 Frame = +3

Query: 75  MENLIKQTRARYSGVQQGSRDTSGRVRFSSVEVEKGQADSTRDRRIPPQKTQSFKGDKK- 251
           MENL+KQ RAR+ G  +G+++                A S+R+R+IP Q+TQ+FKG++K 
Sbjct: 1   MENLLKQIRARFPGAGEGNKE----------------AGSSRERKIPLQRTQTFKGERKG 44

Query: 252 RSWLSRQFSGQMNQENNYSNSXXXXXXXXXXXXXIKSIEDLGIEAQKR 395
            SWLSRQF+ +M++ ++  N              + S+E+  I  QK+
Sbjct: 45  LSWLSRQFASRMSRGHDLENDSEYATAVAAAAYAVHSLEETRIPDQKK 92


>ref|XP_002512116.1| DNA binding protein, putative [Ricinus communis]
           gi|223549296|gb|EEF50785.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 340

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 3/110 (2%)
 Frame = +3

Query: 75  MENLIKQT-RARYSGVQQGSRDTSGRVRFSSVEVEKGQADSTRDRRIPPQKTQSFKGDKK 251
           ME+LIKQT R R++G Q                   G   S+++RRIP QKT SFK +KK
Sbjct: 1   MEHLIKQTTRVRFTGQQS-----------------TGAPGSSKERRIPVQKTPSFKEEKK 43

Query: 252 R--SWLSRQFSGQMNQENNYSNSXXXXXXXXXXXXXIKSIEDLGIEAQKR 395
           R  +W  RQ S +MNQ N+ SN              I S+E+     QK+
Sbjct: 44  RPQNWFRRQISWKMNQ-NHDSNGIERAIAVAAAAYVIASLEESSTPEQKK 92


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