BLASTX nr result
ID: Bupleurum21_contig00034583
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00034583 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI27257.3| unnamed protein product [Vitis vinifera] 67 2e-09 ref|XP_002512116.1| DNA binding protein, putative [Ricinus commu... 55 8e-06 >emb|CBI27257.3| unnamed protein product [Vitis vinifera] Length = 377 Score = 67.0 bits (162), Expect = 2e-09 Identities = 38/108 (35%), Positives = 61/108 (56%), Gaps = 1/108 (0%) Frame = +3 Query: 75 MENLIKQTRARYSGVQQGSRDTSGRVRFSSVEVEKGQADSTRDRRIPPQKTQSFKGDKK- 251 MENL+KQ RAR+ G +G+++ A S+R+R+IP Q+TQ+FKG++K Sbjct: 1 MENLLKQIRARFPGAGEGNKE----------------AGSSRERKIPLQRTQTFKGERKG 44 Query: 252 RSWLSRQFSGQMNQENNYSNSXXXXXXXXXXXXXIKSIEDLGIEAQKR 395 SWLSRQF+ +M++ ++ N + S+E+ I QK+ Sbjct: 45 LSWLSRQFASRMSRGHDLENDSEYATAVAAAAYAVHSLEETRIPDQKK 92 >ref|XP_002512116.1| DNA binding protein, putative [Ricinus communis] gi|223549296|gb|EEF50785.1| DNA binding protein, putative [Ricinus communis] Length = 340 Score = 54.7 bits (130), Expect = 8e-06 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 3/110 (2%) Frame = +3 Query: 75 MENLIKQT-RARYSGVQQGSRDTSGRVRFSSVEVEKGQADSTRDRRIPPQKTQSFKGDKK 251 ME+LIKQT R R++G Q G S+++RRIP QKT SFK +KK Sbjct: 1 MEHLIKQTTRVRFTGQQS-----------------TGAPGSSKERRIPVQKTPSFKEEKK 43 Query: 252 R--SWLSRQFSGQMNQENNYSNSXXXXXXXXXXXXXIKSIEDLGIEAQKR 395 R +W RQ S +MNQ N+ SN I S+E+ QK+ Sbjct: 44 RPQNWFRRQISWKMNQ-NHDSNGIERAIAVAAAAYVIASLEESSTPEQKK 92