BLASTX nr result

ID: Bupleurum21_contig00034576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034576
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalact...   229   2e-58
ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like ...   229   2e-58
ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyas...   225   3e-57
ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_004163448.1| PREDICTED: rhamnogalacturonate lyase B-like ...   223   2e-56

>ref|XP_004161743.1| PREDICTED: LOW QUALITY PROTEIN: rhamnogalacturonate lyase B-like
           [Cucumis sativus]
          Length = 635

 Score =  229 bits (583), Expect = 2e-58
 Identities = 101/158 (63%), Positives = 125/158 (79%)
 Frame = +3

Query: 3   GRLLVRDRYLNEELMTANSAYVGLAPPGGIGSWQTENKGYQFWTQTDAEGYFLIEHVRAG 182
           G+L V DRY+NEE M A  AYVGLA PG +GSWQTE KGYQFWT+TDA+G F IEHVR G
Sbjct: 337 GKLFVLDRYVNEEKMPATDAYVGLAAPGDVGSWQTEKKGYQFWTKTDADGSFSIEHVRIG 396

Query: 183 KYSLYAWVPGIIGDYKYESFINIISGSSIKLGEIEYVPPRNGATIWEIGIPDRTAAEFYV 362
            Y+LYAWVPG IGDY+Y+  IN+ SGS + +G++ Y PPRNG T+WEIGIPDR+AAEFY+
Sbjct: 397 DYNLYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYI 456

Query: 363 PQPNPMLLNKLYVQVNTQGFRQYGLWDRYTDEYPDQDL 476
           P P+P  +NKLY+  +   FRQYGLW++Y + +PD DL
Sbjct: 457 PDPDPKYINKLYIN-HPDRFRQYGLWEKYAELHPDADL 493


>ref|XP_004136251.1| PREDICTED: rhamnogalacturonate lyase B-like [Cucumis sativus]
          Length = 642

 Score =  229 bits (583), Expect = 2e-58
 Identities = 101/158 (63%), Positives = 125/158 (79%)
 Frame = +3

Query: 3   GRLLVRDRYLNEELMTANSAYVGLAPPGGIGSWQTENKGYQFWTQTDAEGYFLIEHVRAG 182
           G+L V DRY+NEE M A  AYVGLA PG +GSWQTE KGYQFWT+TDA+G F IEHVR G
Sbjct: 337 GKLFVLDRYVNEEKMPATDAYVGLAAPGDVGSWQTEKKGYQFWTKTDADGSFSIEHVRIG 396

Query: 183 KYSLYAWVPGIIGDYKYESFINIISGSSIKLGEIEYVPPRNGATIWEIGIPDRTAAEFYV 362
            Y+LYAWVPG IGDY+Y+  IN+ SGS + +G++ Y PPRNG T+WEIGIPDR+AAEFY+
Sbjct: 397 DYNLYAWVPGFIGDYRYDVLINVSSGSDMDVGDLVYEPPRNGPTLWEIGIPDRSAAEFYI 456

Query: 363 PQPNPMLLNKLYVQVNTQGFRQYGLWDRYTDEYPDQDL 476
           P P+P  +NKLY+  +   FRQYGLW++Y + +PD DL
Sbjct: 457 PDPDPKYINKLYIN-HPDRFRQYGLWEKYAELHPDADL 493


>ref|XP_003526529.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Glycine max]
          Length = 643

 Score =  225 bits (574), Expect = 3e-57
 Identities = 99/158 (62%), Positives = 124/158 (78%)
 Frame = +3

Query: 3   GRLLVRDRYLNEELMTANSAYVGLAPPGGIGSWQTENKGYQFWTQTDAEGYFLIEHVRAG 182
           GRLLVR+RY+N++ ++A  AYVGLAPPG +GSWQ E K YQFW + D +GYF + ++RAG
Sbjct: 340 GRLLVRERYINDDYVSAKGAYVGLAPPGDVGSWQRECKNYQFWARADDDGYFSVSNIRAG 399

Query: 183 KYSLYAWVPGIIGDYKYESFINIISGSSIKLGEIEYVPPRNGATIWEIGIPDRTAAEFYV 362
            Y++YAWVPG IGDYKY+  INI  G  I LG++ Y PPR+G T+WEIGIPDR+AAEFYV
Sbjct: 400 DYNVYAWVPGFIGDYKYDVVINITEGCDIDLGDLVYEPPRDGPTLWEIGIPDRSAAEFYV 459

Query: 363 PQPNPMLLNKLYVQVNTQGFRQYGLWDRYTDEYPDQDL 476
           P PNP  +NKLYV  +   FRQYGLW+RY + YPD+DL
Sbjct: 460 PDPNPKYINKLYVN-HPDKFRQYGLWERYAELYPDKDL 496


>ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|222854486|gb|EEE92033.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score =  225 bits (574), Expect = 3e-57
 Identities = 102/158 (64%), Positives = 125/158 (79%)
 Frame = +3

Query: 3   GRLLVRDRYLNEELMTANSAYVGLAPPGGIGSWQTENKGYQFWTQTDAEGYFLIEHVRAG 182
           G+LLVRDRY+N+ L  A+SAYVGLA PG +GSWQTE+KGYQFW + D  G+F+I++VRAG
Sbjct: 377 GQLLVRDRYVNQRLTYASSAYVGLAAPGDVGSWQTESKGYQFWIRADRHGHFVIKNVRAG 436

Query: 183 KYSLYAWVPGIIGDYKYESFINIISGSSIKLGEIEYVPPRNGATIWEIGIPDRTAAEFYV 362
            YSLYAWVPG+IGDYKY + I I  GS I+ G + Y PPRNG T+W+IGIPDRTAAEFYV
Sbjct: 437 NYSLYAWVPGVIGDYKYGANITINPGSRIRFGHLIYEPPRNGPTLWDIGIPDRTAAEFYV 496

Query: 363 PQPNPMLLNKLYVQVNTQGFRQYGLWDRYTDEYPDQDL 476
           P   P L+N LY +   + FRQYGLW+RY+D YP+ DL
Sbjct: 497 PDGYPTLMNTLYTREPAEKFRQYGLWNRYSDLYPNDDL 534


>ref|XP_004163448.1| PREDICTED: rhamnogalacturonate lyase B-like [Cucumis sativus]
          Length = 641

 Score =  223 bits (567), Expect = 2e-56
 Identities = 97/158 (61%), Positives = 126/158 (79%)
 Frame = +3

Query: 3   GRLLVRDRYLNEELMTANSAYVGLAPPGGIGSWQTENKGYQFWTQTDAEGYFLIEHVRAG 182
           G+LLV+D Y+NE+L+ A+ A+VGLAPPG +GSWQ E+KGYQFW++ D  G F I+ VR G
Sbjct: 338 GKLLVKDSYVNEDLIPADGAFVGLAPPGDVGSWQRESKGYQFWSRADESGNFSIDGVRPG 397

Query: 183 KYSLYAWVPGIIGDYKYESFINIISGSSIKLGEIEYVPPRNGATIWEIGIPDRTAAEFYV 362
            Y+LYAWVPG IGDY+Y++ IN+  GS + +G+I Y PPR GAT+WEIGIPDR+AAEFYV
Sbjct: 398 DYNLYAWVPGFIGDYRYDALINLTEGSEVDMGDITYEPPRQGATLWEIGIPDRSAAEFYV 457

Query: 363 PQPNPMLLNKLYVQVNTQGFRQYGLWDRYTDEYPDQDL 476
           P PNP  +NKLY+  +   FRQYGLW+RY++ +PD DL
Sbjct: 458 PDPNPNYVNKLYLN-HPDKFRQYGLWERYSELFPDSDL 494


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