BLASTX nr result

ID: Bupleurum21_contig00034544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034544
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278694.1| PREDICTED: protein CHUP1, chloroplastic-like...   102   6e-20
ref|XP_002313983.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like...    87   2e-15
ref|XP_002892381.1| hypothetical protein ARALYDRAFT_470733 [Arab...    82   5e-14
ref|XP_003539347.1| PREDICTED: protein CHUP1, chloroplastic-like...    81   1e-13

>ref|XP_002278694.1| PREDICTED: protein CHUP1, chloroplastic-like [Vitis vinifera]
          Length = 433

 Score =  102 bits (253), Expect = 6e-20
 Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 1/124 (0%)
 Frame = -2

Query: 373 FIKKEFEASLLRIHSLENENQELKQEVARLKAQVNSLKAHDAERKSVLWKKLQSSLDNKV 194
           F+ KE E+SL R ++LE ENQELKQEVARLKAQ++SLKAHD ERKS+LWKKLQSS DN  
Sbjct: 12  FLNKELESSLARNNALEKENQELKQEVARLKAQISSLKAHDNERKSMLWKKLQSSFDNSN 71

Query: 193 TEKPKHRSSFSVDVQERSQIFEKFCQKGDLTEATVKKDMXXXXXXXXXXXXXIT-SLLKQ 17
            +  + + + +V   E     E  C + D  E+  +K+               T   LK+
Sbjct: 72  ADAKQQKPTNTVRTPEPKLAVENLCPRSDSPESAPRKERPARIPKPPPRPTTATPPSLKE 131

Query: 16  VQGN 5
           V GN
Sbjct: 132 VNGN 135


>ref|XP_002313983.1| predicted protein [Populus trichocarpa] gi|222850391|gb|EEE87938.1|
           predicted protein [Populus trichocarpa]
          Length = 388

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 50/89 (56%), Positives = 63/89 (70%)
 Frame = -2

Query: 406 RSSGEESLRFAFIKKEFEASLLRIHSLENENQELKQEVARLKAQVNSLKAHDAERKSVLW 227
           R   +ESL   ++KKE EA+LLR  SLE ENQEL+QEV RLKAQ++SLKAHD ERKS+LW
Sbjct: 2   RKEEDESL-IIYLKKEVEAALLRTDSLEKENQELQQEVVRLKAQISSLKAHDNERKSMLW 60

Query: 226 KKLQSSLDNKVTEKPKHRSSFSVDVQERS 140
           KKLQ+ +D+  T+    + S  V V   S
Sbjct: 61  KKLQNPIDSSKTDVFLQKQSDFVKVTPSS 89


>ref|XP_003539335.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 494

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 45/109 (41%), Positives = 68/109 (62%)
 Frame = -2

Query: 406 RSSGEESLRFAFIKKEFEASLLRIHSLENENQELKQEVARLKAQVNSLKAHDAERKSVLW 227
           + S E       +KK  +  + R  SLE EN++L+QEVARLK+Q+ SLKAH+ ERKS+LW
Sbjct: 49  KMSLENDSEITHLKKNLKVQMERNVSLEKENKDLRQEVARLKSQIMSLKAHNIERKSMLW 108

Query: 226 KKLQSSLDNKVTEKPKHRSSFSVDVQERSQIFEKFCQKGDLTEATVKKD 80
           KK+Q S+D   ++  +H+++  V + E+S   E+     DL E  + KD
Sbjct: 109 KKIQKSMDGNNSDTLQHKAAVKVIMLEKSPPNERVHTNSDLQETPIVKD 157


>ref|XP_002892381.1| hypothetical protein ARALYDRAFT_470733 [Arabidopsis lyrata subsp.
           lyrata] gi|297338223|gb|EFH68640.1| hypothetical protein
           ARALYDRAFT_470733 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 44/88 (50%), Positives = 58/88 (65%)
 Frame = -2

Query: 400 SGEESLRFAFIKKEFEASLLRIHSLENENQELKQEVARLKAQVNSLKAHDAERKSVLWKK 221
           +GE+      + KE +ASL+R   LE +N EL+QEVARL+A V++LKAHD ERKSVLWKK
Sbjct: 4   NGEDDSDLMRLVKELQASLVRNDKLEKDNHELRQEVARLRAHVSNLKAHDNERKSVLWKK 63

Query: 220 LQSSLDNKVTEKPKHRSSFSVDVQERSQ 137
           LQSS D   T+    ++  SV    + Q
Sbjct: 64  LQSSYDGSNTDGSNLKAPESVKSNTKGQ 91


>ref|XP_003539347.1| PREDICTED: protein CHUP1, chloroplastic-like [Glycine max]
          Length = 474

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/109 (39%), Positives = 65/109 (59%)
 Frame = -2

Query: 406 RSSGEESLRFAFIKKEFEASLLRIHSLENENQELKQEVARLKAQVNSLKAHDAERKSVLW 227
           + S E       +KK  +  + R  SLE EN+  +QEVARLK+Q+ SLKAH+ ERKS+LW
Sbjct: 49  KMSLENESEITHLKKNLKVQMERNVSLEKENKNHRQEVARLKSQIMSLKAHNIERKSMLW 108

Query: 226 KKLQSSLDNKVTEKPKHRSSFSVDVQERSQIFEKFCQKGDLTEATVKKD 80
           KK+Q ++D   ++  +H+++  V + E+S   E+     DL E    KD
Sbjct: 109 KKIQKAMDGNNSDTLQHKAAVKVTMLEKSPPNERVHTNSDLLETPKVKD 157


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