BLASTX nr result

ID: Bupleurum21_contig00034522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034522
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like...    82   5e-14
ref|XP_002519118.1| ring finger protein, putative [Ricinus commu...    79   4e-13
ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like...    74   2e-11
ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like...    74   2e-11

>ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|222850231|gb|EEE87778.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/95 (49%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
 Frame = -1

Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSE--XXXXXXXXXXXXXXRKSFASPM 132
           PF SI+K RVFS R+YRGMKSPFFR++G G FPLSE                 KS ASP 
Sbjct: 273 PFGSISKARVFSFRHYRGMKSPFFRRRGSGFFPLSERFSTVGGGGGGGSSRRCKSMASPQ 332

Query: 131 FVXXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27
           F+                  GDPEALLSPER+NRR
Sbjct: 333 FLRSSVGSSMAAFSSSRLRCGDPEALLSPERFNRR 367


>ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 393

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 47/93 (50%), Positives = 52/93 (55%)
 Frame = -1

Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSEXXXXXXXXXXXXXXRKSFASPMFV 126
           PF S+ K RVFS RYYRGMKSPFFR++  G FPLSE               KS ASPMF+
Sbjct: 303 PFGSLGKPRVFSFRYYRGMKSPFFRRR--GFFPLSESSVRYGSGGSSSRRSKSIASPMFL 360

Query: 125 XXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27
                             GDPEALLSPER+NRR
Sbjct: 361 RSSGVAAAAAFSSSRLRCGDPEALLSPERFNRR 393


>ref|XP_002519118.1| ring finger protein, putative [Ricinus communis]
           gi|223541781|gb|EEF43329.1| ring finger protein,
           putative [Ricinus communis]
          Length = 402

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 49/96 (51%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
 Frame = -1

Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQK--GGGLFPLSE-XXXXXXXXXXXXXXRKSFASP 135
           PF S++K RVFS RYYRGMKSPFFR++  GGG FPLSE                KS ASP
Sbjct: 311 PFGSLSKPRVFSFRYYRGMKSPFFRRRGGGGGFFPLSERFPAGGGGGGGSSRRSKSMASP 370

Query: 134 MFVXXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27
           MF+                  GDPEALLSPER+NRR
Sbjct: 371 MFM----RSSVAAFSSSRLRCGDPEALLSPERFNRR 402


>ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus]
           gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2
           finger protein ATL65-like [Cucumis sativus]
           gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2
           finger protein ATL65-like [Cucumis sativus]
          Length = 421

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 47/97 (48%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
 Frame = -1

Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSE--XXXXXXXXXXXXXXRKSFASPM 132
           PF S+ K RVFS RYYRGMKSPFFR++ GG FPLSE                 KS  SPM
Sbjct: 326 PFGSLPKARVFSFRYYRGMKSPFFRRR-GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPM 384

Query: 131 FV--XXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27
           F+                    GDPEALLSPER+NRR
Sbjct: 385 FLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 421


>ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max]
          Length = 399

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
 Frame = -1

Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSE----XXXXXXXXXXXXXXRKSFAS 138
           PF S+ K RVFS RYYRGMKSPFFR++  G FPLSE                   KS AS
Sbjct: 305 PFGSLGKPRVFSFRYYRGMKSPFFRRR--GFFPLSESSVRYGGGGGGGGSSSRRSKSIAS 362

Query: 137 PMFVXXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27
           PMF+                  GDPEALLSPER+N R
Sbjct: 363 PMFLRSSGVTSAAAFSSSRLRCGDPEALLSPERFNGR 399


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