BLASTX nr result
ID: Bupleurum21_contig00034522
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00034522 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|2... 82 3e-14 ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like... 82 5e-14 ref|XP_002519118.1| ring finger protein, putative [Ricinus commu... 79 4e-13 ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like... 74 2e-11 ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like... 74 2e-11 >ref|XP_002313823.1| predicted protein [Populus trichocarpa] gi|222850231|gb|EEE87778.1| predicted protein [Populus trichocarpa] Length = 367 Score = 82.4 bits (202), Expect = 3e-14 Identities = 47/95 (49%), Positives = 53/95 (55%), Gaps = 2/95 (2%) Frame = -1 Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSE--XXXXXXXXXXXXXXRKSFASPM 132 PF SI+K RVFS R+YRGMKSPFFR++G G FPLSE KS ASP Sbjct: 273 PFGSISKARVFSFRHYRGMKSPFFRRRGSGFFPLSERFSTVGGGGGGGSSRRCKSMASPQ 332 Query: 131 FVXXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27 F+ GDPEALLSPER+NRR Sbjct: 333 FLRSSVGSSMAAFSSSRLRCGDPEALLSPERFNRR 367 >ref|XP_003541102.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max] Length = 393 Score = 82.0 bits (201), Expect = 5e-14 Identities = 47/93 (50%), Positives = 52/93 (55%) Frame = -1 Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSEXXXXXXXXXXXXXXRKSFASPMFV 126 PF S+ K RVFS RYYRGMKSPFFR++ G FPLSE KS ASPMF+ Sbjct: 303 PFGSLGKPRVFSFRYYRGMKSPFFRRR--GFFPLSESSVRYGSGGSSSRRSKSIASPMFL 360 Query: 125 XXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27 GDPEALLSPER+NRR Sbjct: 361 RSSGVAAAAAFSSSRLRCGDPEALLSPERFNRR 393 >ref|XP_002519118.1| ring finger protein, putative [Ricinus communis] gi|223541781|gb|EEF43329.1| ring finger protein, putative [Ricinus communis] Length = 402 Score = 79.0 bits (193), Expect = 4e-13 Identities = 49/96 (51%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Frame = -1 Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQK--GGGLFPLSE-XXXXXXXXXXXXXXRKSFASP 135 PF S++K RVFS RYYRGMKSPFFR++ GGG FPLSE KS ASP Sbjct: 311 PFGSLSKPRVFSFRYYRGMKSPFFRRRGGGGGFFPLSERFPAGGGGGGGSSRRSKSMASP 370 Query: 134 MFVXXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27 MF+ GDPEALLSPER+NRR Sbjct: 371 MFM----RSSVAAFSSSRLRCGDPEALLSPERFNRR 402 >ref|XP_004145402.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus] gi|449472703|ref|XP_004153673.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus] gi|449532533|ref|XP_004173235.1| PREDICTED: RING-H2 finger protein ATL65-like [Cucumis sativus] Length = 421 Score = 73.6 bits (179), Expect = 2e-11 Identities = 47/97 (48%), Positives = 52/97 (53%), Gaps = 4/97 (4%) Frame = -1 Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSE--XXXXXXXXXXXXXXRKSFASPM 132 PF S+ K RVFS RYYRGMKSPFFR++ GG FPLSE KS SPM Sbjct: 326 PFGSLPKARVFSFRYYRGMKSPFFRRR-GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPM 384 Query: 131 FV--XXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27 F+ GDPEALLSPER+NRR Sbjct: 385 FLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNRR 421 >ref|XP_003539029.1| PREDICTED: RING-H2 finger protein ATL65-like [Glycine max] Length = 399 Score = 73.6 bits (179), Expect = 2e-11 Identities = 46/97 (47%), Positives = 51/97 (52%), Gaps = 4/97 (4%) Frame = -1 Query: 305 PFSSITKHRVFSLRYYRGMKSPFFRQKGGGLFPLSE----XXXXXXXXXXXXXXRKSFAS 138 PF S+ K RVFS RYYRGMKSPFFR++ G FPLSE KS AS Sbjct: 305 PFGSLGKPRVFSFRYYRGMKSPFFRRR--GFFPLSESSVRYGGGGGGGGSSSRRSKSIAS 362 Query: 137 PMFVXXXXXXXXXXXXXXXXXXGDPEALLSPERYNRR 27 PMF+ GDPEALLSPER+N R Sbjct: 363 PMFLRSSGVTSAAAFSSSRLRCGDPEALLSPERFNGR 399