BLASTX nr result

ID: Bupleurum21_contig00034480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034480
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|2...   173   3e-41
ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|2...   162   5e-38
ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264...   152   1e-34
ref|XP_002517992.1| conserved hypothetical protein [Ricinus comm...   140   4e-31
ref|XP_002867460.1| hypothetical protein ARALYDRAFT_491952 [Arab...   125   1e-26

>ref|XP_002319928.1| predicted protein [Populus trichocarpa] gi|222858304|gb|EEE95851.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score =  173 bits (439), Expect = 3e-41
 Identities = 120/273 (43%), Positives = 163/273 (59%), Gaps = 22/273 (8%)
 Frame = +2

Query: 5   EAMNPSDLQIWDNAAFDNGESQDS----SISWCVPKSSIVNRTDSS----------VNNN 142
           + ++  ++QIW+NAAFDNGES+DS    S  W     S  ++ + S          VN++
Sbjct: 9   DVVDAPEVQIWNNAAFDNGESEDSLNLKSSWWNQSLESDASKENLSPVCEKSSPIYVNSS 68

Query: 143 CSSKENRSVVNPNCAIEAEATKI---KSIKPASEQDVRDAKKIDMEIEDIEKQMNLLAAR 313
             +K  +S  NP  +  + + K+   K ++   E    D KKID+EIE+IEK++  L++R
Sbjct: 69  KPTKPLQSNPNPFNSQGSNSMKVGLSKMVEKNEEIKNHDEKKIDIEIEEIEKEIKRLSSR 128

Query: 314 LHVLKLEKAEQTLKLNEMRGGRIVRARFMENKDSVKENNGGKLKTIEEKWVSSVKSKVGR 493
           L VL+LEKAE+ L     + GR+V A+FME K SVK         IEE  VSS KSK+ R
Sbjct: 129 LEVLRLEKAERNLSKTVEKRGRVVAAKFMEQKQSVK---------IEEPLVSSAKSKINR 179

Query: 494 RGVSMCPGEIRGGSLHTDGGIKSRQLYKTTEM-TPVKTIENRRKSCFWKLQDVDELKAI- 667
           RGVS+ P EI  GS       KSR L+   EM TPV T +NRRKSCFWKL+++DELKA  
Sbjct: 180 RGVSLGPSEIFSGS-------KSRLLFGKQEMKTPVST-QNRRKSCFWKLEEIDELKATK 231

Query: 668 ---KSSSLSPKLKDVVGKIQGVGGPRQAVTTIG 757
              KS S+SP+ +  V KIQ    P+QAVTT+G
Sbjct: 232 ERGKSLSVSPRSRKNVSKIQ---VPKQAVTTVG 261


>ref|XP_002325689.1| predicted protein [Populus trichocarpa] gi|222862564|gb|EEF00071.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  162 bits (411), Expect = 5e-38
 Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 21/272 (7%)
 Frame = +2

Query: 5   EAMNPSDLQIWDNAAFDNGESQDS----SISWCVPKSSIVNRTDSS----------VNNN 142
           + ++  ++QIW+NAAFDNGES+DS    S  W     S  ++ + S          VN++
Sbjct: 9   DGVDAPEVQIWNNAAFDNGESEDSLNLKSSWWTQSLESNGSKENLSPVCEKSSPVFVNSS 68

Query: 143 CSSKENRSVVNPNCAIEAEATKI---KSIKPASEQDVRDAKKIDMEIEDIEKQMNLLAAR 313
             +K  +S  N   ++ + + KI   K +    E   RD KKIDMEIE+IE+++  L++R
Sbjct: 69  NPTKPLQSNTNLVNSLGSSSLKIGVSKMVAKNEEIKNRDEKKIDMEIEEIEREIKRLSSR 128

Query: 314 LHVLKLEKAEQTLKLNEMRGGRIVRARFMENKDSVKENNGGKLKTIEEKWVSSVKSKVGR 493
           L  L+LEK E+ +     + GRIV A+FM+ K SVK         IEE  + S KSK+ R
Sbjct: 129 LEALRLEKVERNISKTIEKRGRIVAAKFMDQKQSVK---------IEEPLIPSSKSKINR 179

Query: 494 RGVSMCPGEIRGGSLHTDGGIKSRQLYKTTEMTPVKTIENRRKSCFWKLQDVDELKAI-- 667
           RGVS+ P EI  GS       KSR      +M    +I+NRRKSCFWKL+++DELKA   
Sbjct: 180 RGVSLGPSEILSGS-------KSRLFCGKQDMNTPVSIQNRRKSCFWKLEEIDELKATKE 232

Query: 668 --KSSSLSPKLKDVVGKIQGVGGPRQAVTTIG 757
             KS S+SP+ +  V KIQ    P+QAVTT+G
Sbjct: 233 RGKSLSVSPRSRKNVSKIQ---FPKQAVTTVG 261


>ref|XP_002271315.1| PREDICTED: uncharacterized protein LOC100264907 [Vitis vinifera]
          Length = 466

 Score =  152 bits (383), Expect = 1e-34
 Identities = 116/276 (42%), Positives = 164/276 (59%), Gaps = 31/276 (11%)
 Frame = +2

Query: 20  SDLQIWDNAAFDNGESQDSS---ISWCVPKSSIVNRTDSSVNNNCSSKEN-------RSV 169
           SDLQIW+NAAFD+G+ +DSS     W  P  +I      S++++   KEN       +S 
Sbjct: 7   SDLQIWNNAAFDSGDFEDSSGIKAPW-TPLKNIFTNVSESIDSD-QGKENIIPVIVKQSA 64

Query: 170 VN-----PNCAIEAEATKIKS----IKPASEQDVRDAKKIDMEIEDIEKQMNLLAARLHV 322
           V+     P   ++A++  +KS    +K   E++VRD  KID EIE+I  +++ L++RL  
Sbjct: 65  VSVKSSVPMNPLQAKSATVKSQGKSVKVLEEEEVRDEGKIDAEIEEIRLEISRLSSRLDE 124

Query: 323 LKLEKAEQTLKLNEMRGGRIVRARFMENKDSVKENNGGKLKTIEEKWVSSVKSKVGRRGV 502
           L LEK +++ K+ E R GRIV A+FME K SVK  +G  +KT E    SSV++KV RRGV
Sbjct: 125 LCLEKVKRSAKMVEKR-GRIVAAKFMEQKQSVKGGDG--VKTEES---SSVRTKVHRRGV 178

Query: 503 SMCPGEI-----RGGSL---HTDGGIKSRQLYKTTEMTPVKTIENRRKSCFWKLQDVDEL 658
           S+ P EI     RG SL       G + R L K  E+TP+ T ++RRKSCFWKL+D+DE 
Sbjct: 179 SLGPSEIVAGVRRGMSLGPSEIAAGGRLRHLGK-PEVTPIST-QSRRKSCFWKLEDIDEG 236

Query: 659 KAI----KSSSLSPKLKDVVGKIQGVGGPRQAVTTI 754
           K      KS ++SPK + ++ K Q     +QA TTI
Sbjct: 237 KVTKERGKSMTVSPKNRKIISKTQ---ASKQAATTI 269


>ref|XP_002517992.1| conserved hypothetical protein [Ricinus communis]
           gi|223542974|gb|EEF44510.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 443

 Score =  140 bits (352), Expect = 4e-31
 Identities = 110/290 (37%), Positives = 151/290 (52%), Gaps = 39/290 (13%)
 Frame = +2

Query: 5   EAMNPSDLQIWDNAAFDNGESQDS-----SISWCVPKSSIVNRTDSSVNNNCSSKENRSV 169
           +A+NP +LQ+W+NAAFDNGES+DS     S SW             S+ ++CS KEN S 
Sbjct: 9   DAINPPELQVWNNAAFDNGESEDSIGMTKSSSWWT----------QSLESSCS-KENMSP 57

Query: 170 V--NPNCAIEAEATKIKSIKPASEQ----------------------------DVRDAKK 259
           V   P  + ++  + I  IKP +                              +  +  K
Sbjct: 58  VFEKPPVSFKSSVSSIP-IKPLNSNSNIVNSQGNNKNPMKILLKQGGLVSKIVNQEEETK 116

Query: 260 IDMEIEDIEKQMNLLAARLHVLKLEKAEQTLKLNEMRGGRIVRARFMENKDSVKENNGGK 439
           ID EIE IEK+++ L++RL  L+LEKAE++L   E + GR V  + ME K +VK      
Sbjct: 117 IDKEIEQIEKEISRLSSRLEALRLEKAERSLNTVE-KTGRFVPEKIMEPKQTVK------ 169

Query: 440 LKTIEEKWVSSVKSKVGRRGVSMCPGEIRGGSLHTDGGIKSRQLYKTTEMTPVKTIENRR 619
              IEE        K+ RRGVS+ P EI   +       K+R L K    TPV T +NRR
Sbjct: 170 ---IEEP------PKINRRGVSLGPSEIYSAT-------KARLLSKQEMSTPVST-KNRR 212

Query: 620 KSCFWKLQDVDELKAI----KSSSLSPKLKDVVGKIQGVGGPRQAVTTIG 757
           KSCFWKL+++DELKA     KSSS+SP+ +  + K+Q    P+ A TTIG
Sbjct: 213 KSCFWKLEEIDELKATKERGKSSSVSPRSRKNLSKVQ---APKMAATTIG 259


>ref|XP_002867460.1| hypothetical protein ARALYDRAFT_491952 [Arabidopsis lyrata subsp.
           lyrata] gi|297313296|gb|EFH43719.1| hypothetical protein
           ARALYDRAFT_491952 [Arabidopsis lyrata subsp. lyrata]
          Length = 404

 Score =  125 bits (314), Expect = 1e-26
 Identities = 98/272 (36%), Positives = 147/272 (54%), Gaps = 20/272 (7%)
 Frame = +2

Query: 2   SEAMN-PSDLQIWDNAAFDNGESQDSSI---SWCVPKSSIVNRTDSSVNNNCSSKENRSV 169
           +E +N P  LQIW+NAAFD+G+SQ +S    SW        +  + S +++CS KEN+  
Sbjct: 7   TETLNAPPKLQIWNNAAFDDGDSQITSAIEASW--------SHLNESFDSDCS-KENQFP 57

Query: 170 VNPNCAI-------EAEATKIKSIKPASEQD---VRDAKKIDMEIEDIEKQMNLLAARLH 319
           ++ + ++       EA + K K  K  S  D    RD + ID EIE++EK++  L+ RL 
Sbjct: 58  ISVSSSLRSSVSITEAPSAKSKIGKTKSGADRSKKRDERDIDAEIEEVEKEIGRLSTRLE 117

Query: 320 VLKLEKAEQTLKLNEMRGGRIVRARFMENKDSVKENNGGKLKTIEEKWVSSVKSKVGRRG 499
            L+LEKAEQT +   +R GRIV A+FME++  VK          +E   +  KS+  RRG
Sbjct: 118 SLRLEKAEQTARSIAIR-GRIVPAKFMESQKQVK---------FDESSFTGSKSRTTRRG 167

Query: 500 VSMCPGEIRGGSLHTDGGIKSRQLYKTTEMTPVKTIENRRKSCFWKLQDVDELKAI---- 667
           VS+ P EI   +             K+  +TP+++ +NRRKSCF+KL  ++E K      
Sbjct: 168 VSLGPAEIFNSA------------KKSETVTPLQSAQNRRKSCFFKLPGIEEGKVTTRGK 215

Query: 668 --KSSSLSPKLKDVVGKIQGVGGPRQAVTTIG 757
              S SLSP+ +    K +     +QA TT+G
Sbjct: 216 GRTSLSLSPRSR----KAKMTAAQKQAATTVG 243


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