BLASTX nr result

ID: Bupleurum21_contig00034473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034473
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302319.1| predicted protein [Populus trichocarpa] gi|1...   130   2e-28
ref|XP_002302318.1| predicted protein [Populus trichocarpa] gi|1...   128   8e-28
gb|ABK92755.1| unknown [Populus trichocarpa]                          123   3e-26
ref|XP_002285736.1| PREDICTED: blue copper protein-like [Vitis v...   120   2e-25
emb|CBI19206.3| unnamed protein product [Vitis vinifera]              119   5e-25

>ref|XP_002302319.1| predicted protein [Populus trichocarpa] gi|118481543|gb|ABK92714.1|
           unknown [Populus trichocarpa]
           gi|222844045|gb|EEE81592.1| predicted protein [Populus
           trichocarpa]
          Length = 188

 Score =  130 bits (327), Expect = 2e-28
 Identities = 71/133 (53%), Positives = 88/133 (66%), Gaps = 4/133 (3%)
 Frame = -2

Query: 510 LVFKYGSGHTVDEVSSDDYSSCTVGNSITTDNTGSTTIPLKTAGPHYFICGVIGHCSGGM 331
           LVF YG GHTVDEVS+ DYS+CT GN+IT+D++G+TTI LKTAG HYFICGV GHC  GM
Sbjct: 57  LVFNYGGGHTVDEVSASDYSTCTTGNAITSDSSGATTIALKTAGTHYFICGVPGHCGSGM 116

Query: 330 KVAVTVAGSG-TLGPSAASVPPA---TAGDXXXXXXXXXXXSGNVPTLSSLSSSVKPFAA 163
           KVAVTVA +G +  PS++  P +   T              S NVP  SSL  ++ PF A
Sbjct: 117 KVAVTVAAAGSSTSPSSSGTPSSDSTTTSPAGSNVTNYKPSSNNVPD-SSLGINISPFVA 175

Query: 162 MWLGTCFALVYMI 124
           +  GTC A+  M+
Sbjct: 176 I-AGTCVAVFVMV 187


>ref|XP_002302318.1| predicted protein [Populus trichocarpa] gi|118482561|gb|ABK93201.1|
           unknown [Populus trichocarpa]
           gi|222844044|gb|EEE81591.1| predicted protein [Populus
           trichocarpa]
          Length = 188

 Score =  128 bits (322), Expect = 8e-28
 Identities = 69/134 (51%), Positives = 86/134 (64%), Gaps = 3/134 (2%)
 Frame = -2

Query: 510 LVFKYGSGHTVDEVSSDDYSSCTVGNSITTDNTGSTTIPLKTAGPHYFICGVIGHCSGGM 331
           LVF YG GHTVDEV + DYS+CT GN+IT+D++G+TTI LKTAG HYFICGV GHC  GM
Sbjct: 57  LVFNYGGGHTVDEVRASDYSTCTTGNAITSDSSGATTIALKTAGTHYFICGVPGHCGSGM 116

Query: 330 KVAVTVAGSGTLGPSAASVPPA---TAGDXXXXXXXXXXXSGNVPTLSSLSSSVKPFAAM 160
           KVAVTVA +G+    ++  P +   T              S NVP  SSL  ++ PF A+
Sbjct: 117 KVAVTVAAAGSSTSPSSGTPSSDGTTTSPAGSNVTNYKPSSNNVPD-SSLGINISPFVAL 175

Query: 159 WLGTCFALVYMIVS 118
             GTC A+  M+ S
Sbjct: 176 -AGTCVAVFVMVFS 188


>gb|ABK92755.1| unknown [Populus trichocarpa]
          Length = 188

 Score =  123 bits (308), Expect = 3e-26
 Identities = 67/133 (50%), Positives = 84/133 (63%), Gaps = 3/133 (2%)
 Frame = -2

Query: 510 LVFKYGSGHTVDEVSSDDYSSCTVGNSITTDNTGSTTIPLKTAGPHYFICGVIGHCSGGM 331
           LVF YG GHTVDEV + DYS+CT GN+IT+D++G+TTI LKTAG HYFICGV GHC  GM
Sbjct: 57  LVFNYGGGHTVDEVRASDYSTCTTGNAITSDSSGATTIALKTAGTHYFICGVPGHCGSGM 116

Query: 330 KVAVTVAGSGTLGPSAASVPPA---TAGDXXXXXXXXXXXSGNVPTLSSLSSSVKPFAAM 160
           KVAVTVA +G+    ++  P +   T              S NVP  SSL  ++ PF A 
Sbjct: 117 KVAVTVAAAGSSTSPSSGTPSSDGTTTSPAGSNVTNYKPSSNNVPD-SSLGINISPFVA- 174

Query: 159 WLGTCFALVYMIV 121
            L   F  V+++V
Sbjct: 175 -LAGTFVAVFVVV 186


>ref|XP_002285736.1| PREDICTED: blue copper protein-like [Vitis vinifera]
          Length = 187

 Score =  120 bits (301), Expect = 2e-25
 Identities = 64/135 (47%), Positives = 83/135 (61%), Gaps = 4/135 (2%)
 Frame = -2

Query: 510 LVFKYGSGHTVDEVSSDDYSSCTVGNSITTDNTGSTTIPLKTAGPHYFICGVIGHCSGGM 331
           LVF YG GHTVDEVS+ DYS+CTVGN+IT+D+TG+TTI LK  G HYFICGVIGHC  GM
Sbjct: 54  LVFNYGGGHTVDEVSASDYSTCTVGNAITSDSTGATTISLKKTGTHYFICGVIGHCGSGM 113

Query: 330 KVAVTVAGSGTLGPSAASVPPATAGDXXXXXXXXXXXSGNVPTL----SSLSSSVKPFAA 163
           K+AVTV    T  P  +S    ++G            +   P+     SS  ++  PF A
Sbjct: 114 KLAVTVESGKTTAPPTSSSATPSSGAATTSPATPTATTTTTPSSTVAHSSAGNAFSPFVA 173

Query: 162 MWLGTCFALVYMIVS 118
           + + T  AL  +++S
Sbjct: 174 VVI-TWLALFLLVLS 187


>emb|CBI19206.3| unnamed protein product [Vitis vinifera]
          Length = 206

 Score =  119 bits (298), Expect = 5e-25
 Identities = 62/127 (48%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
 Frame = -2

Query: 510 LVFKYGSGHTVDEVSSDDYSSCTVGNSITTDNTGSTTIPLKTAGPHYFICGVIGHCSGGM 331
           LVF YG GHTVDEVS+ DYS+CTVGN+IT+D+TG+TTI LK  G HYFICGVIGHC  GM
Sbjct: 73  LVFNYGGGHTVDEVSASDYSTCTVGNAITSDSTGATTISLKKTGTHYFICGVIGHCGSGM 132

Query: 330 KVAVTVAGSGTLGPSAASVPPATAGDXXXXXXXXXXXSGNVP--TLSSLSSSVKPFAAMW 157
           K+AVTV    T  P  +S    ++G            +   P  T+ SLS     F+  +
Sbjct: 133 KLAVTVESGKTTAPPTSSSATPSSGAATTSPATPTATTTTTPSSTVCSLSILYLSFSLSY 192

Query: 156 LGTCFAL 136
           +G    L
Sbjct: 193 MGEMLVL 199


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