BLASTX nr result

ID: Bupleurum21_contig00034471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034471
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]     85   7e-15
gb|EEC77218.1| hypothetical protein OsI_15753 [Oryza sativa Indi...    75   5e-12
emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]          75   5e-12
ref|XP_003575819.1| PREDICTED: uncharacterized protein LOC100832...    75   7e-12
gb|AAX95302.1| MuDR family transposase, putative [Oryza sativa J...    74   9e-12

>gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]
          Length = 558

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/115 (37%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 CKWFLYAS-LNWHNTLQIKSVGPEHTCVRQQRGLPLINSAFLAKKYLNDFRMNPEWKIPA 208
           CKWF+YAS  N      IK++GP+H+C  Q+     I+S F  KKY ++F++NP W +  
Sbjct: 97  CKWFIYASKANEDEPFMIKTIGPDHSCGNQREN-KTIDSEFSTKKYADEFKINPSWGVKE 155

Query: 207 FHKKVILDLQIDFKPHVLRRARRKCMRKIHGTDGEQYARLYDYRTELLKRNPHST 43
           F   V+         +   RA++K +  I GT  EQ+  L+DY  EL + NP +T
Sbjct: 156 FQAHVMRKHSCTLSRYQSYRAKKKALNLITGTKKEQFDMLWDYCAELRRSNPGTT 210


>gb|EEC77218.1| hypothetical protein OsI_15753 [Oryza sativa Indica Group]
          Length = 804

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 CKWFLYASL-NWHNTLQIKSVGPEHTCVRQQRGLPLINSAFLAKKYLNDFRMNPEWKIPA 208
           C W L AS+ N    L ++    +HTC +Q   +  + + +LAK+Y+ +FR N +  + +
Sbjct: 541 CPWMLSASMDNRVKCLVVREYIEKHTCSKQWE-IKAVTAKYLAKRYIEEFRDNDKMTLMS 599

Query: 207 FHKKVILDLQIDFKPHVLRRARRKCMRKIHGTDGEQYARLYDYRTELLKRNPHST 43
           F KK+  +L +    H L RARR  MR I+G +  QY +L+DY  EL   NP S+
Sbjct: 600 FAKKIQKELHLTPSRHKLGRARRMAMRAIYGDEISQYNQLWDYGQELRTSNPGSS 654


>emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]
          Length = 939

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 CKWFLYASL-NWHNTLQIKSVGPEHTCVRQQRGLPLINSAFLAKKYLNDFRMNPEWKIPA 208
           C W L AS+ N    L ++    +HTC +Q   +  + + +LAK+Y+ +FR N +  + +
Sbjct: 302 CPWMLSASMDNRVKCLVVREYIEKHTCSKQWE-IKAVTAKYLAKRYIEEFRDNDKMTLMS 360

Query: 207 FHKKVILDLQIDFKPHVLRRARRKCMRKIHGTDGEQYARLYDYRTELLKRNPHST 43
           F KK+  +L +    H L RARR  MR I+G +  QY +L+DY  EL   NP S+
Sbjct: 361 FAKKIQKELHLTPSRHKLGRARRMAMRAIYGDEISQYNQLWDYGQELRTSNPGSS 415


>ref|XP_003575819.1| PREDICTED: uncharacterized protein LOC100832575 [Brachypodium
           distachyon]
          Length = 886

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
 Frame = -3

Query: 384 CKWFLYASLNWHNT-LQIKSVGPEHTCVRQQRGLPLINSAFLAKKYLNDFRMNPEWKIPA 208
           CKW +YAS    N  LQ+ ++  EH C+  +R   L+ +  +A KY    + NP WK+  
Sbjct: 420 CKWMIYASKTTKNKWLQVSTLVDEHHCI-PRRDNNLVTTNVIAAKYGKLIKTNPTWKLEN 478

Query: 207 FHKKVILDLQIDFKPHVLRRARRKCMRKIHGTDGEQYARLYDYRTELLKRNPHSTVEFQF 28
             + V+ D+ +D      +RA+   ++K+      +Y++++DY+ ELL+ NP  TV    
Sbjct: 479 IKETVLQDIGVDVHISKCKRAKNIALKKMFDATHGEYSQVFDYQLELLRSNPGGTVHVML 538

Query: 27  EEGAP 13
           +   P
Sbjct: 539 DSDQP 543


>gb|AAX95302.1| MuDR family transposase, putative [Oryza sativa Japonica Group]
           gi|108864243|gb|ABA92642.2| transposon protein,
           putative, Mutator sub-class [Oryza sativa Japonica
           Group]
          Length = 894

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
 Frame = -3

Query: 384 CKWFLYASL-NWHNTLQIKSVGPEHTCVRQQRGLPLINSAFLAKKYLNDFRMNPEWKIPA 208
           C W L AS+ N    L ++    +HTC +Q   +  + + +LAK+Y+ +FR N +  + +
Sbjct: 475 CPWMLSASMDNRVKCLVVREYIEKHTCTKQWE-IKAVTAKYLAKRYIEEFRDNDKMTLMS 533

Query: 207 FHKKVILDLQIDFKPHVLRRARRKCMRKIHGTDGEQYARLYDYRTELLKRNPHST 43
           F KK+  +L +    H L RARR  MR I+G +  QY +L DY  EL   NP S+
Sbjct: 534 FAKKIQKELHLTPSRHKLGRARRMAMRAIYGDEISQYNQLCDYGQELRTSNPGSS 588


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