BLASTX nr result

ID: Bupleurum21_contig00034454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034454
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinife...   104   7e-21
ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like ...   100   2e-19
ref|XP_003623323.1| LAX [Medicago truncatula] gi|355498338|gb|AE...   100   2e-19
ref|XP_002334947.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002873016.1| basic helix-loop-helix family protein [Arabi...    96   2e-18

>emb|CAN77067.1| hypothetical protein VITISV_022410 [Vitis vinifera]
           gi|297735648|emb|CBI18142.3| unnamed protein product
           [Vitis vinifera]
          Length = 161

 Score =  104 bits (260), Expect = 7e-21
 Identities = 51/60 (85%), Positives = 57/60 (95%)
 Frame = -3

Query: 237 SRAVKLSTDPQSVAARERRHRISEKFKILQSLVTGGSKLDTVSMLEEAIVYVKYLKTQLW 58
           S+ VKLSTDPQSVAARERRHRIS++FKILQSLV GG+K+DTVSMLEEAI YVKYLKTQ+W
Sbjct: 31  SKGVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAIHYVKYLKTQIW 90


>ref|XP_004148629.1| PREDICTED: transcription factor bHLH87-like [Cucumis sativus]
           gi|449532778|ref|XP_004173357.1| PREDICTED:
           transcription factor bHLH87-like [Cucumis sativus]
          Length = 195

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/57 (84%), Positives = 55/57 (96%)
 Frame = -3

Query: 228 VKLSTDPQSVAARERRHRISEKFKILQSLVTGGSKLDTVSMLEEAIVYVKYLKTQLW 58
           VKLSTDPQSVAARERRHRIS++FKILQSLV GG+K+DTVSML+EAI YVK+LKTQ+W
Sbjct: 46  VKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLDEAIHYVKFLKTQIW 102


>ref|XP_003623323.1| LAX [Medicago truncatula] gi|355498338|gb|AES79541.1| LAX [Medicago
           truncatula]
          Length = 153

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/58 (82%), Positives = 55/58 (94%)
 Frame = -3

Query: 231 AVKLSTDPQSVAARERRHRISEKFKILQSLVTGGSKLDTVSMLEEAIVYVKYLKTQLW 58
           +VKLSTDPQSVAARERRHRIS++FKILQS++ GGSKLDTVSMLEEAI YVK+LK Q+W
Sbjct: 29  SVKLSTDPQSVAARERRHRISDRFKILQSMIPGGSKLDTVSMLEEAIHYVKFLKKQIW 86


>ref|XP_002334947.1| predicted protein [Populus trichocarpa] gi|222875273|gb|EEF12404.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/59 (83%), Positives = 55/59 (93%)
 Frame = -3

Query: 237 SRAVKLSTDPQSVAARERRHRISEKFKILQSLVTGGSKLDTVSMLEEAIVYVKYLKTQL 61
           S  VKLSTDPQSVAARERRHRIS++FKILQSLV GG+K+DTVSMLEEAI YVK+LKTQ+
Sbjct: 32  SGGVKLSTDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVSMLEEAINYVKFLKTQV 90


>ref|XP_002873016.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297318853|gb|EFH49275.1| basic
           helix-loop-helix family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 898

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = -3

Query: 222 LSTDPQSVAARERRHRISEKFKILQSLVTGGSKLDTVSMLEEAIVYVKYLKTQLWW 55
           LSTDPQSVAARERRHRISE+FKILQS+V GG+K+DTVSMLEEAI YVK+LK Q+W+
Sbjct: 43  LSTDPQSVAARERRHRISERFKILQSMVPGGAKMDTVSMLEEAIRYVKFLKAQIWF 98


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