BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034452
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis v...   171   7e-41
emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]   171   7e-41
ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis t...   162   3e-38
emb|CAA16524.1| DNA topoisomerase like-protein [Arabidopsis thal...   162   3e-38
ref|XP_002869340.1| DNA topoisomerase family protein [Arabidopsi...   160   1e-37

>ref|XP_002280960.2| PREDICTED: DNA topoisomerase 1-like [Vitis vinifera]
          Length = 1185

 Score =  171 bits (432), Expect = 7e-41
 Identities = 84/124 (67%), Positives = 103/124 (83%), Gaps = 3/124 (2%)
 Frame = -3

Query: 364  GVLDEDSLKLYTLIWSRTLACQMEPAIFGQTQVDIANADQSIIFRSSCSRLEFPGYQAVF 185
            GVLDEDSLKLYTLIWSRT+ACQMEPA   Q QVDI NA++S++FRS+CS +EF GYQAV+
Sbjct: 753  GVLDEDSLKLYTLIWSRTMACQMEPATIDQIQVDIGNANESVVFRSTCSGVEFFGYQAVY 812

Query: 184  EDVEARLIRNRDNEGNECSDV---LSRLKSGDPLYLGKVDLKQHHTQPPPRFSEGSLVKT 14
            +DVEA+ IR  +NEGNE  +V   LS LK+GDPLYL  ++L+QHHT PP R+SEG+LVK 
Sbjct: 813  KDVEAKAIRVDENEGNERGEVFKALSSLKAGDPLYLSLLELEQHHTLPPSRYSEGALVKK 872

Query: 13   MEEL 2
            +EEL
Sbjct: 873  LEEL 876


>emb|CAN67233.1| hypothetical protein VITISV_020021 [Vitis vinifera]
          Length = 1039

 Score =  171 bits (432), Expect = 7e-41
 Identities = 84/124 (67%), Positives = 103/124 (83%), Gaps = 3/124 (2%)
 Frame = -3

Query: 364  GVLDEDSLKLYTLIWSRTLACQMEPAIFGQTQVDIANADQSIIFRSSCSRLEFPGYQAVF 185
            GVLDEDSLKLYTLIWSRT+ACQMEPA   Q QVDI NA++S++FRS+CS +EF GYQAV+
Sbjct: 766  GVLDEDSLKLYTLIWSRTMACQMEPATIDQIQVDIGNANESVVFRSTCSGVEFFGYQAVY 825

Query: 184  EDVEARLIRNRDNEGNECSDV---LSRLKSGDPLYLGKVDLKQHHTQPPPRFSEGSLVKT 14
            +DVEA+ IR  +NEGNE  +V   LS LK+GDPLYL  ++L+QHHT PP R+SEG+LVK 
Sbjct: 826  KDVEAKAIRVDENEGNERGEVFKALSSLKAGDPLYLSLLELEQHHTLPPSRYSEGALVKK 885

Query: 13   MEEL 2
            +EEL
Sbjct: 886  LEEL 889


>ref|NP_194849.3| DNA topoisomerase, type IA, core [Arabidopsis thaliana]
            gi|332660478|gb|AEE85878.1| DNA topoisomerase, type IA,
            core [Arabidopsis thaliana]
          Length = 1284

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/124 (66%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
 Frame = -3

Query: 361  VLDEDSLKLYTLIWSRTLACQMEPAIFGQTQVDIANADQSIIFRSSCSRLEFPGYQAVFE 182
            +LD DSLKLYTLIWSR +ACQMEPA   Q Q+DI NA +SIIFRSSCS++EF GYQAV+E
Sbjct: 844  LLDADSLKLYTLIWSRAVACQMEPASIAQIQLDIGNASESIIFRSSCSKVEFLGYQAVYE 903

Query: 181  DVEARLIRNRDN----EGNECSDVLSRLKSGDPLYLGKVDLKQHHTQPPPRFSEGSLVKT 14
            D EA+ I+N DN    E  E    LS LK GD L +G+V+LKQHHTQ PPR+SEGSLVK 
Sbjct: 904  DPEAKAIKNNDNDQSSEREETFKTLSSLKDGDLLQIGEVELKQHHTQHPPRYSEGSLVKK 963

Query: 13   MEEL 2
            +EEL
Sbjct: 964  LEEL 967


>emb|CAA16524.1| DNA topoisomerase like-protein [Arabidopsis thaliana]
            gi|7270023|emb|CAB79839.1| DNA topoisomerase like-protein
            [Arabidopsis thaliana]
          Length = 1179

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/124 (66%), Positives = 96/124 (77%), Gaps = 4/124 (3%)
 Frame = -3

Query: 361  VLDEDSLKLYTLIWSRTLACQMEPAIFGQTQVDIANADQSIIFRSSCSRLEFPGYQAVFE 182
            +LD DSLKLYTLIWSR +ACQMEPA   Q Q+DI NA +SIIFRSSCS++EF GYQAV+E
Sbjct: 782  LLDADSLKLYTLIWSRAVACQMEPASIAQIQLDIGNASESIIFRSSCSKVEFLGYQAVYE 841

Query: 181  DVEARLIRNRDN----EGNECSDVLSRLKSGDPLYLGKVDLKQHHTQPPPRFSEGSLVKT 14
            D EA+ I+N DN    E  E    LS LK GD L +G+V+LKQHHTQ PPR+SEGSLVK 
Sbjct: 842  DPEAKAIKNNDNDQSSEREETFKTLSSLKDGDLLQIGEVELKQHHTQHPPRYSEGSLVKK 901

Query: 13   MEEL 2
            +EEL
Sbjct: 902  LEEL 905


>ref|XP_002869340.1| DNA topoisomerase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315176|gb|EFH45599.1| DNA topoisomerase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1325

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/124 (64%), Positives = 97/124 (78%), Gaps = 4/124 (3%)
 Frame = -3

Query: 361  VLDEDSLKLYTLIWSRTLACQMEPAIFGQTQVDIANADQSIIFRSSCSRLEFPGYQAVFE 182
            +LD DSLKLYTLIWSR +ACQMEPA   Q Q+DI NA +SIIFRSSCS++EF GYQAV+E
Sbjct: 905  LLDADSLKLYTLIWSRAVACQMEPASIAQIQLDIGNASESIIFRSSCSKVEFLGYQAVYE 964

Query: 181  DVEARLIRNRD----NEGNECSDVLSRLKSGDPLYLGKVDLKQHHTQPPPRFSEGSLVKT 14
            D EA+ I+N+D    +E  E    LS LK GD L +G+V+LKQHHTQ PPR+SEGSL+K 
Sbjct: 965  DPEAKAIKNKDGDQSSEREETFKTLSLLKDGDLLQIGEVELKQHHTQNPPRYSEGSLIKK 1024

Query: 13   MEEL 2
            +EEL
Sbjct: 1025 LEEL 1028