BLASTX nr result

ID: Bupleurum21_contig00034449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034449
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510642.1| conserved hypothetical protein [Ricinus comm...    76   2e-12
ref|XP_002307771.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_002510642.1| conserved hypothetical protein [Ricinus communis]
           gi|223551343|gb|EEF52829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 230

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 54/114 (47%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
 Frame = -3

Query: 323 EMMN*LRSLKEMK------SDLYTNDHNLAVVVNVLQEVRVTIXXXXXXXXXXXXMPNPD 162
           E +  LRSLK MK      SD+ T DH L VVV VL+EVRV              +P  D
Sbjct: 100 ETLKCLRSLKGMKRKSVVISDISTTDHKLVVVVEVLREVRVVTVSIVESLLSLISIPWLD 159

Query: 161 SHNYRSYIGSFTSKFMRVDS-LSLWENCDTMTFQTENKRLETVEIAIEDLEFEL 3
             + R   GSF SKF    S  SL++ CD    Q+ NKRLE VEIAIEDLE EL
Sbjct: 160 QRSTR---GSFRSKFFSSTSNQSLYDFCDETALQSANKRLEAVEIAIEDLEVEL 210


>ref|XP_002307771.1| predicted protein [Populus trichocarpa] gi|222857220|gb|EEE94767.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 48/113 (42%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
 Frame = -3

Query: 323 EMMN*LRSLKEMK-----SDLYTNDHNLAVVVNVLQEVRVTIXXXXXXXXXXXXMPNPDS 159
           E M  L+SLK MK     SD+   DH++ VVV VL+EVRVT             +P  D 
Sbjct: 100 ETMKCLKSLKGMKGKSVTSDISNVDHSIIVVVEVLREVRVTTITIVESLLSLISIPWLDQ 159

Query: 158 HNYRSYIGSFT-SKFMRVDSLSLWENCDTMTFQTENKRLETVEIAIEDLEFEL 3
            + +   GSF  S F+R    S ++ CD     T +KRLE VEIA+EDLE EL
Sbjct: 160 GSSK---GSFIRSTFLRSSGQSSYDFCDETALHTADKRLEAVEIAVEDLEVEL 209


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