BLASTX nr result

ID: Bupleurum21_contig00034435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034435
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621771.1| F-box family protein [Medicago truncatula] g...    59   5e-07
ref|XP_002525835.1| conserved hypothetical protein [Ricinus comm...    57   2e-06
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   3e-06
ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|35548...    56   3e-06
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...    56   3e-06

>ref|XP_003621771.1| F-box family protein [Medicago truncatula]
           gi|355496786|gb|AES77989.1| F-box family protein
           [Medicago truncatula]
          Length = 524

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/49 (48%), Positives = 36/49 (73%)
 Frame = +1

Query: 211 LPGEIMNEEILARLPVETLLRVRCVCKSWESLFFTPDFVQAHFNKSTNN 357
           LP E+M  EIL+RLPV +L++++CVCKSW ++   P F++ H N+S  N
Sbjct: 94  LPDEVM-AEILSRLPVRSLMQIKCVCKSWNTIISDPKFIKMHLNRSARN 141


>ref|XP_002525835.1| conserved hypothetical protein [Ricinus communis]
           gi|223534840|gb|EEF36529.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 371

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +1

Query: 211 LPGEIMNEEILARLPVETLLRVRCVCKSWESLFFTPDFVQAHFNKS--TNNSIYQDCLVA 384
           +P EI+ E IL RLPV++LL+ RCVC+SW SL     F+  H N S   NN ++   LV 
Sbjct: 5   IPQEILIE-ILKRLPVKSLLKYRCVCQSWHSLITNSSFISTHINHSIECNNRVHSYALVK 63

Query: 385 RKS 393
           +KS
Sbjct: 64  QKS 66


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/70 (45%), Positives = 45/70 (64%)
 Frame = +1

Query: 139 GDDTTAPLKKKAKLWSCTRTTRTELPGEIMNEEILARLPVETLLRVRCVCKSWESLFFTP 318
           G  TT+   ++  L S +  T T LP E++ +EIL RLPV+ LL++RCVCKSW+SL   P
Sbjct: 24  GRFTTSTESRRQTLTSSSSHTHT-LPIELI-QEILQRLPVKFLLQLRCVCKSWKSLISHP 81

Query: 319 DFVQAHFNKS 348
            F + H + S
Sbjct: 82  QFAKNHLHSS 91


>ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|355487161|gb|AES68364.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +1

Query: 211 LPGEIMNEEILARLPVETLLRVRCVCKSWESLFFTPDFVQAHFNKSTNNSIY 366
           LP E++ EEIL+RLPV+ LL++RC CKSW SL   P F + H + ST + ++
Sbjct: 52  LPFELI-EEILSRLPVKLLLQLRCACKSWSSLISNPKFAKKHLSMSTRHVLH 102


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = +1

Query: 211 LPGEIMNEEILARLPVETLLRVRCVCKSWESLFFTPDFVQAHFNKSTNNSIY 366
           LP E++ EEIL+RLPV+ LL++RC CKSW SL   P F + H + ST + ++
Sbjct: 52  LPFELI-EEILSRLPVKLLLQLRCACKSWSSLISNPKFAKKHLSMSTRHVLH 102


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