BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034434
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515739.1| pentatricopeptide repeat-containing protein,...   150   8e-35
ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002335015.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002879404.1| pentatricopeptide repeat-containing protein ...   133   1e-29

>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 613

 Score =  150 bits (380), Expect = 8e-35
 Identities = 70/125 (56%), Positives = 95/125 (76%)
 Frame = -3

Query: 375 CPVSDFVSMVNVSYEEPRIVHKLFDMLFRVYADNKRFKQSLEVFEYMKNNGFEIDDRSCM 196
           C VSDFVS+++  + EP+ V KL DMLFRVY DN  F++  +VF+YM +NG +IDDRSC+
Sbjct: 125 CSVSDFVSLIDNRFHEPKFVEKLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSCI 184

Query: 195 VYLLAVKRCDRFDLLYELFRRMVDSGVKITVYSMTMVIDGLCKMGEVEKARSLMDEMVGR 16
           V LLA+KR D+  +    F++MV+  V +TVYSMT+VIDGLCK G VE+A+ LM EM G+
Sbjct: 185 VCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGK 244

Query: 15  GVEPN 1
           G++PN
Sbjct: 245 GIKPN 249


>ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/123 (53%), Positives = 86/123 (69%)
 Frame = -3

Query: 369 VSDFVSMVNVSYEEPRIVHKLFDMLFRVYADNKRFKQSLEVFEYMKNNGFEIDDRSCMVY 190
           V   VS +   + EP IV K  DMLFRVY DN+ F  SLEVF+Y +  GFEID+RSC  +
Sbjct: 100 VERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEF 159

Query: 189 LLAVKRCDRFDLLYELFRRMVDSGVKITVYSMTMVIDGLCKMGEVEKARSLMDEMVGRGV 10
           LLA+KR    +L  E  R+MVDSG++I V S T V+DGLCK GEV +A++LMDE+V +G 
Sbjct: 160 LLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGF 219

Query: 9   EPN 1
           +P+
Sbjct: 220 KPS 222


>ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  136 bits (343), Expect = 2e-30
 Identities = 66/123 (53%), Positives = 86/123 (69%)
 Frame = -3

Query: 369 VSDFVSMVNVSYEEPRIVHKLFDMLFRVYADNKRFKQSLEVFEYMKNNGFEIDDRSCMVY 190
           V   VS +   + EP IV K  DMLFRVY DN+ F  SLEVF+Y +  GFEID+RSC  +
Sbjct: 104 VERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEF 163

Query: 189 LLAVKRCDRFDLLYELFRRMVDSGVKITVYSMTMVIDGLCKMGEVEKARSLMDEMVGRGV 10
           LLA+KR    +L  E  R+MVDSG++I V S T V+DGLCK GEV +A++LMDE+V +G 
Sbjct: 164 LLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGF 223

Query: 9   EPN 1
           +P+
Sbjct: 224 KPS 226


>ref|XP_002335015.1| predicted protein [Populus trichocarpa] gi|222832609|gb|EEE71086.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  136 bits (342), Expect = 2e-30
 Identities = 67/127 (52%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
 Frame = -3

Query: 375 CPVSDFVSMVNVS--YEEPRIVHKLFDMLFRVYADNKRFKQSLEVFEYMKNNGFEIDDRS 202
           CPV++ VS+V  S    EP  V KL DMLFRVYAD   F++   VF+YM +   +IDDRS
Sbjct: 127 CPVANLVSLVEESGFNNEPNFVEKLCDMLFRVYADCNLFEEGFRVFDYMVSYELKIDDRS 186

Query: 201 CMVYLLAVKRCDRFDLLYELFRRMVDSGVKITVYSMTMVIDGLCKMGEVEKARSLMDEMV 22
           C+V+LLA+KRCD+ +    LF+RMV+  V++TVYS+T+VIDGLCK   V++A  LM EM 
Sbjct: 187 CIVFLLALKRCDKMEACLGLFKRMVEFNVEVTVYSLTIVIDGLCKRRRVKRAIDLMIEMA 246

Query: 21  GRGVEPN 1
            +G++PN
Sbjct: 247 SKGIKPN 253


>ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325243|gb|EFH55663.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 605

 Score =  133 bits (335), Expect = 1e-29
 Identities = 61/114 (53%), Positives = 85/114 (74%)
 Frame = -3

Query: 345 NVSYEEPRIVHKLFDMLFRVYADNKRFKQSLEVFEYMKNNGFEIDDRSCMVYLLAVKRCD 166
           ++S E+     K FD++FRVY DN  F++ L VF+YM   G  ID+RSC+V+L+A K+  
Sbjct: 125 DISEEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRR 184

Query: 165 RFDLLYELFRRMVDSGVKITVYSMTMVIDGLCKMGEVEKARSLMDEMVGRGVEP 4
           R DL  E FRRMVDSGVKITVYS+T+V++GLC+ GEVEK++ L+ E  G+G++P
Sbjct: 185 RIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKP 238



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
 Frame = -3

Query: 378 ICPVSDF----VSMVNVSYEEPRIVHKLFDMLFRVYADNKRFKQSLEVFEYMKNNGFEID 211
           +C V +     + M  +  +   I   +F+ L   Y       ++  +++ M+  GF+ D
Sbjct: 355 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQAD 414

Query: 210 DRSCMVYLLAVKRCDRFDLLYELFRRMVDSGVKITVYSMTMVIDGLCKMGEVEKARSLMD 31
             +C        R  R+D   +   RM++ GV+++  S T +ID  CK G VE+A+ L  
Sbjct: 415 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFV 474

Query: 30  EMVGRGVEPN 1
           EM  + V+PN
Sbjct: 475 EMSSKEVQPN 484