BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034431
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...   355   5e-96
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]            338   5e-91
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   332   5e-89
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           330   1e-88
emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]   315   8e-84

>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score =  355 bits (911), Expect = 5e-96
 Identities = 167/241 (69%), Positives = 203/241 (84%)
 Frame = -3

Query: 733  GHFKLDEKMCPSTEKEWEEMKEVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGRE 554
            GH KL +KMCP+T +E   M +VPYSSAVGSLMYAMVCTRPDIA+AVGVVSR+L NPG+E
Sbjct: 1087 GHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKE 1146

Query: 553  HWEAVKWILKYLKGTSGLCLRYEDVEPVLEGFVDADMAGHPEVMKSTSGMLFTFAGGAVA 374
            HWEAVKWIL+YL+GT+G CL +   +P+L+G+ DADMAG  +  KS++G LFTF+GGA++
Sbjct: 1147 HWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAIS 1206

Query: 373  WQSKLQKCVALSTTESEYIAACEAGKELIWLKRFLQELGLKQDKYELYCDSQSAIDLSKN 194
            WQSKLQKCVALSTTE+EYIAA E GKE+IWLKRFLQELGL Q +Y +YCDSQSAIDLSKN
Sbjct: 1207 WQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKN 1266

Query: 193  ATCHTRTKHINVRYHWLREQIEEGEMQVEKIHTDDNPADMMTKVVPREKFELCKRCTCMT 14
            +  H RTKHI+VRYHW+RE +++  ++V KI T++NPADM+TKVVPR KFELCK    M 
Sbjct: 1267 SMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGMH 1326

Query: 13   S 11
            S
Sbjct: 1327 S 1327


>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
          Length = 687

 Score =  338 bits (868), Expect = 5e-91
 Identities = 163/240 (67%), Positives = 194/240 (80%)
 Frame = -3

Query: 730  HFKLDEKMCPSTEKEWEEMKEVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGREH 551
            HFKL ++ CP+TEKE E M  +PYSS VGSLMYAMVCTRPDIA+AVG+VSRYL+NP + H
Sbjct: 448  HFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLANPSKVH 507

Query: 550  WEAVKWILKYLKGTSGLCLRYEDVEPVLEGFVDADMAGHPEVMKSTSGMLFTFAGGAVAW 371
            WEAVKWIL+YL+GTS L L +   EP+LEGF DADMAG  +  KSTSG LF FA GA++W
Sbjct: 508  WEAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAGDLDNRKSTSGYLFKFARGAISW 567

Query: 370  QSKLQKCVALSTTESEYIAACEAGKELIWLKRFLQELGLKQDKYELYCDSQSAIDLSKNA 191
            QSKLQKCVALSTTE EYIAA EA KE++WLKRFLQELGLKQ +Y ++CDS+SA+DLSKN 
Sbjct: 568  QSKLQKCVALSTTEVEYIAAVEASKEMLWLKRFLQELGLKQSEYVVFCDSKSAMDLSKNI 627

Query: 190  TCHTRTKHINVRYHWLREQIEEGEMQVEKIHTDDNPADMMTKVVPREKFELCKRCTCMTS 11
              H RTKHI+VRYHWLR  I+E  M+++KIHT+ N ADM+TKVVP  K E C +   M+S
Sbjct: 628  MYHARTKHIDVRYHWLRVVIKERLMKLKKIHTNKNGADMLTKVVPGSKLEFCSKLAGMSS 687


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  332 bits (851), Expect = 5e-89
 Identities = 153/232 (65%), Positives = 193/232 (83%)
 Frame = -3

Query: 730  HFKLDEKMCPSTEKEWEEMKEVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGREH 551
            HFKL  +  PST+KE E+M+ VPY+SA+GSLMYAMVCTRPDIAYAVGVVSR+LSNPGR H
Sbjct: 1059 HFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLSNPGRHH 1118

Query: 550  WEAVKWILKYLKGTSGLCLRYEDVEPVLEGFVDADMAGHPEVMKSTSGMLFTFAGGAVAW 371
            WEAVKWI++YL+GTS L L +   +P+L G+ D+DMAG  +  KSTSG L TF+GGAV+W
Sbjct: 1119 WEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRKSTSGYLMTFSGGAVSW 1178

Query: 370  QSKLQKCVALSTTESEYIAACEAGKELIWLKRFLQELGLKQDKYELYCDSQSAIDLSKNA 191
            QS+LQKCVALSTTE+EYIAA EA KEL+W+K F+QELG KQ +Y +YCD+QSAI LSKN+
Sbjct: 1179 QSRLQKCVALSTTEAEYIAAVEACKELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNS 1238

Query: 190  TCHTRTKHINVRYHWLREQIEEGEMQVEKIHTDDNPADMMTKVVPREKFELC 35
            T H R+KHI+VRYHW+R+ + +   ++EKIHTD+N +DM+TK +PREK  +C
Sbjct: 1239 TYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVC 1290


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  330 bits (847), Expect = 1e-88
 Identities = 153/233 (65%), Positives = 196/233 (84%)
 Frame = -3

Query: 730  HFKLDEKMCPSTEKEWEEMKEVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGREH 551
            HF+L  K  PST+ E  +M+ +PY+SAVGSLMYAMVCTRPDIA+AVGVVSR+LSNPG+EH
Sbjct: 1089 HFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPGKEH 1148

Query: 550  WEAVKWILKYLKGTSGLCLRYEDVEPVLEGFVDADMAGHPEVMKSTSGMLFTFAGGAVAW 371
            W+AVKWIL+YL+GTS LCL + +  PVL G+ DADMAG  +  KSTSG L  F+GGAV+W
Sbjct: 1149 WDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRKSTSGYLINFSGGAVSW 1208

Query: 370  QSKLQKCVALSTTESEYIAACEAGKELIWLKRFLQELGLKQDKYELYCDSQSAIDLSKNA 191
            QSKLQKCVALSTTE+E+IAA EA KELIW+K+FL ELG  QD Y+L+CDSQSAI L+KNA
Sbjct: 1209 QSKLQKCVALSTTEAEFIAATEACKELIWMKKFLTELGFSQDGYQLFCDSQSAIHLAKNA 1268

Query: 190  TCHTRTKHINVRYHWLREQIEEGEMQVEKIHTDDNPADMMTKVVPREKFELCK 32
            + H+R+KHI+VRY+W+R+ +E+  +++EKIHTD+N +DM+TK +P+ KFE C+
Sbjct: 1269 SFHSRSKHIDVRYNWIRDVLEKKMLRLEKIHTDENGSDMLTKTLPKGKFEFCR 1321


>emb|CAN69911.1| hypothetical protein VITISV_027081 [Vitis vinifera]
          Length = 1204

 Score =  315 bits (806), Expect = 8e-84
 Identities = 145/232 (62%), Positives = 186/232 (80%)
 Frame = -3

Query: 730  HFKLDEKMCPSTEKEWEEMKEVPYSSAVGSLMYAMVCTRPDIAYAVGVVSRYLSNPGREH 551
            HFKL  +  PST+KE E+M+ V Y+SAVGSLMY MVCTRPDIAYA+GVV R+LSNPGR H
Sbjct: 905  HFKLSSRHNPSTDKEKEDMRRVSYASAVGSLMYVMVCTRPDIAYAIGVVIRFLSNPGRHH 964

Query: 550  WEAVKWILKYLKGTSGLCLRYEDVEPVLEGFVDADMAGHPEVMKSTSGMLFTFAGGAVAW 371
            WEAVKWI++YL+GTS L L +   +P+L G+ D+DMAG  +  +ST G L TF+GG V+W
Sbjct: 965  WEAVKWIMRYLRGTSKLKLTFGGGKPILVGYTDSDMAGDVDNRRSTLGYLMTFSGGTVSW 1024

Query: 370  QSKLQKCVALSTTESEYIAACEAGKELIWLKRFLQELGLKQDKYELYCDSQSAIDLSKNA 191
            QS+ QKCVALSTTE+EYIAA EA  EL+W+K F+QELG KQ +Y +YCD+QSAI LSKN+
Sbjct: 1025 QSRQQKCVALSTTEAEYIAAXEACNELLWMKCFMQELGFKQQRYVVYCDNQSAIHLSKNS 1084

Query: 190  TCHTRTKHINVRYHWLREQIEEGEMQVEKIHTDDNPADMMTKVVPREKFELC 35
            T H R+KHI+VRYHW+R+ + +   ++EKIHTD+N +DM+TK +PREK  +C
Sbjct: 1085 TYHARSKHIDVRYHWMRDALNDNLFEIEKIHTDNNGSDMLTKTLPREKLGVC 1136