BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034430
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635128.1| PREDICTED: uncharacterized protein LOC100255...   112   2e-23
ref|XP_002528916.1| conserved hypothetical protein [Ricinus comm...   107   8e-22
ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Me...   106   2e-21
ref|XP_002326642.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002304277.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19

>ref|XP_003635128.1| PREDICTED: uncharacterized protein LOC100255037 [Vitis vinifera]
          Length = 1425

 Score =  112 bits (281), Expect = 2e-23
 Identities = 57/125 (45%), Positives = 80/125 (64%), Gaps = 12/125 (9%)
 Frame = +3

Query: 3   KEVQWSAFDSDALPNGVTGVESYSDIFGEFGDGEK-----IEESLTNESNVVY--GNAAY 161
           KEVQWS+F +D+  N   G  SYSD F E G G       +EE+L NE+ +    G+ AY
Sbjct: 134 KEVQWSSFYADSAQNESNGFGSYSDFFSELGVGAGDFPGGVEENLNNEARIASREGHRAY 193

Query: 162 S-DNTHSYYEYQDGQ----VNAAEPKGQDMNSVEYWENLYPGWKYDQNTGKWYQVDGYDA 326
           + +N+ +Y +YQDGQ    +      GQD+N+ +Y EN YPGW+YD ++G+WYQVDGYD 
Sbjct: 194 NAENSVNYVQYQDGQSHEGIMEQNTDGQDLNNSQYQENTYPGWRYDSSSGQWYQVDGYDV 253

Query: 327 TTSVE 341
           T +V+
Sbjct: 254 TANVQ 258


>ref|XP_002528916.1| conserved hypothetical protein [Ricinus communis]
           gi|223531618|gb|EEF33445.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1282

 Score =  107 bits (268), Expect = 8e-22
 Identities = 57/123 (46%), Positives = 72/123 (58%), Gaps = 8/123 (6%)
 Frame = +3

Query: 3   KEVQWSAFDSDALPNGVTGVESYSDIFGEFGDGE-----KIEESLTNESNVVYGNAAYSD 167
           KEV WS+F +D+LPNG  G  SYSD F E G        K+ ES   E+         SD
Sbjct: 140 KEVGWSSFYADSLPNGNHGFGSYSDFFNELGGSSEDFPGKVAESANLENEDGGSRLHNSD 199

Query: 168 NTHSYYEYQD--GQVNAAEPKGQDMNSVEYWENLYPGWKYDQNTGKWYQVDGYDATT-SV 338
           +   Y+E     G+ N     GQD+N+ +YWE++YPGWKYD NTG+WYQVD  D TT S 
Sbjct: 200 SYQGYHEDTQSYGESNKENVNGQDLNNSQYWESMYPGWKYDANTGQWYQVDSSDTTTASA 259

Query: 339 EGS 347
           +GS
Sbjct: 260 QGS 262


>ref|XP_003608705.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|355509760|gb|AES90902.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 1523

 Score =  106 bits (264), Expect = 2e-21
 Identities = 60/145 (41%), Positives = 82/145 (56%), Gaps = 30/145 (20%)
 Frame = +3

Query: 3   KEVQWSAFDSDALPNGVTGVESYSDIFGEFGD---------------------GEKIEES 119
           KE  W+AF+ D+  NG  G ESYSD F EFGD                     G++  ++
Sbjct: 128 KEKDWNAFNVDS--NGGAGSESYSDFFSEFGDQNGKGYDHDLNTEVKHANEIPGDQYAQT 185

Query: 120 LTNESN--VVYGNAAYSDNTHS---YYEYQDGQVNAAEPK----GQDMNSVEYWENLYPG 272
              +SN  V  GN   SD  ++   Y +YQ+GQ   A  +    G+D+NS +YWE+LYPG
Sbjct: 186 YNRDSNTEVKLGNEIPSDGMNASVDYVQYQEGQSYDASARNSTSGEDVNSSQYWESLYPG 245

Query: 273 WKYDQNTGKWYQVDGYDATTSVEGS 347
           WKYD NTG+WYQVD ++AT + +GS
Sbjct: 246 WKYDYNTGQWYQVDEHNATAATQGS 270


>ref|XP_002326642.1| predicted protein [Populus trichocarpa] gi|222833964|gb|EEE72441.1|
           predicted protein [Populus trichocarpa]
          Length = 1379

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/122 (45%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
 Frame = +3

Query: 3   KEVQWSAFDSDALPNGVTGVESYSDIFGEFGDGEKIEES--LTNESNVVYGNAAYSDNTH 176
           KEV W +F +D+  NG  G  S SD F +FG G +   +  + + SNV        DN+ 
Sbjct: 117 KEVGWGSFYADSADNGNHGFGSSSDFFNDFGGGSEDFPANIVQSASNVENRGGGGLDNSV 176

Query: 177 SYYEYQDG-QVNAAEP----KGQDMNSVEYWENLYPGWKYDQNTGKWYQVDGYDATTSVE 341
           SY +YQDG QV          G D++S +YWEN+YPGWK D NTG+WYQVD +DAT S++
Sbjct: 177 SYEQYQDGSQVYGGSVMESVNGLDLSSSQYWENMYPGWKQDANTGQWYQVDAFDATASMQ 236

Query: 342 GS 347
           GS
Sbjct: 237 GS 238


>ref|XP_002304277.1| predicted protein [Populus trichocarpa] gi|222841709|gb|EEE79256.1|
           predicted protein [Populus trichocarpa]
          Length = 1362

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 57/123 (46%), Positives = 72/123 (58%), Gaps = 9/123 (7%)
 Frame = +3

Query: 3   KEVQWSAFDSDALPNGVTGVESYSDIFGEFGDGE-----KIEESLTNESNVVYGNAAYSD 167
           KEV W +F +D+  NG     S SD F +FG        K  ES+ N  N   G     D
Sbjct: 112 KEVGWGSFYADSAENGFG---SSSDFFNDFGGISEDFPVKTVESVGNLENTDGGGL---D 165

Query: 168 NTHSYYEYQDG-QVNAAEPKG---QDMNSVEYWENLYPGWKYDQNTGKWYQVDGYDATTS 335
           N+  Y +YQDG  V A   +    QD+NS ++WEN+YPGWKYD NTG+WYQVD +DAT S
Sbjct: 166 NSVCYQKYQDGAHVYAGSVENVNEQDLNSSQHWENMYPGWKYDANTGQWYQVDAFDATAS 225

Query: 336 VEG 344
           V+G
Sbjct: 226 VQG 228