BLASTX nr result
ID: Bupleurum21_contig00034427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00034427
(566 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003593855.1| Pentatricopeptide repeat-containing protein ... 268 5e-70
ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containi... 265 4e-69
emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera] 261 4e-68
ref|XP_002531431.1| pentatricopeptide repeat-containing protein,... 258 4e-67
ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containi... 256 2e-66
>ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 790
Score = 268 bits (685), Expect = 5e-70
Identities = 125/188 (66%), Positives = 153/188 (81%)
Frame = +3
Query: 3 MLEVLSKTKLCQGAKXXXXXXXXXXXXXTPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAG 182
ML++LSKT+LCQGA+ +P+AFSYVMVS+SRAG +R A+++LT MQKAG
Sbjct: 203 MLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAG 262
Query: 183 IEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAI 362
+EPDL +CNTAIYVLVK NK+EKALRFL+RM++ GI P +V+YNCLI+GYCDVHRI+DA+
Sbjct: 263 VEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDAL 322
Query: 363 GLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHV 542
LI+EM KGC PDKVSYYTVMAFLCKD K+EEVK+L+E M NL+ DQVTYN LI+
Sbjct: 323 ELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYA 382
Query: 543 LSKHGHGD 566
LSKHGH D
Sbjct: 383 LSKHGHAD 390
Score = 77.4 bits (189), Expect = 1e-12
Identities = 44/130 (33%), Positives = 70/130 (53%)
Frame = +3
Query: 168 MQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHR 347
+Q + + PD NT IY L K + AL FL + G V Y+ ++ +C
Sbjct: 364 VQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKN 423
Query: 348 IEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYN 527
I+ A L+ +M SKGC+PD V+Y ++ C+ KI+E KK+L++M +H + VTY
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM-YKHGCKPNTVTYT 482
Query: 528 NLIHVLSKHG 557
L++ L +G
Sbjct: 483 VLLNGLCHNG 492
Score = 69.7 bits (169), Expect = 3e-10
Identities = 39/153 (25%), Positives = 79/153 (51%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
++ ++ + S+ G+ A+ L ++ G D + + K ++KA + M
Sbjct: 376 YNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMY 435
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G P VVTY +I G+C V +I++A ++ +M GC P+ V+Y ++ LC + K
Sbjct: 436 SKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSL 495
Query: 459 EVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHG 557
E ++++ ++ EH + +TY+ ++H L + G
Sbjct: 496 EAREMI-NVSEEHWWTPNAITYSAVMHGLRREG 527
Score = 62.4 bits (150), Expect = 5e-08
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Frame = +3
Query: 87 TPKAFSY--VMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALR 260
TP A +Y VM R G + +A + M + G P+ N I L + + A +
Sbjct: 510 TPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKK 569
Query: 261 FLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLC 440
+L+ G +VV + +I G+C + ++ A+ ++ +M PD ++Y T+ L
Sbjct: 570 YLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALG 629
Query: 441 KDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGD 566
K ++++E +L+ KM + + VTY +IH + G D
Sbjct: 630 KKSRLDEASELIVKMLGK-GIDPTPVTYRAVIHRFCQWGRVD 670
Score = 61.2 bits (147), Expect = 1e-07
Identities = 42/152 (27%), Positives = 72/152 (47%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
+S V+ SF + N+ KA ++ M G PD+ I + K+++A + L +M
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMY 470
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G P+ VTY L+ G C + +A +I+ +P+ ++Y VM L ++ K+
Sbjct: 471 KHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLS 530
Query: 459 EVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKH 554
E L +M E L + V N LI L ++
Sbjct: 531 EACDLTREM-IEKGFLPNPVDINLLIQSLCRN 561
Score = 57.4 bits (137), Expect = 2e-06
Identities = 41/157 (26%), Positives = 69/157 (43%)
Frame = +3
Query: 90 PKAFSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLD 269
P + ++ S R N+ A + L G ++ + IY + ++ AL L+
Sbjct: 548 PVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLE 607
Query: 270 RMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDN 449
M L P +TY L R+++A LI +M KG P V+Y V+ C+
Sbjct: 608 DMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWG 667
Query: 450 KIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGH 560
+++++ KLLEKM + YN +I L G+
Sbjct: 668 RVDDMMKLLEKMIARQPF---KTVYNQVIEKLCYFGN 701
>ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 265 bits (677), Expect = 4e-69
Identities = 124/188 (65%), Positives = 153/188 (81%)
Frame = +3
Query: 3 MLEVLSKTKLCQGAKXXXXXXXXXXXXXTPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAG 182
MLE+LSKTKLCQGAK P+AF YVMVS+SRAG +R AM+VLT MQKAG
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAG 199
Query: 183 IEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAI 362
IEPDL +CNTAI+VLV N+++KA+RFL+RMQ+V I P+V+TYNCLI+GYCD+HR+EDA+
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAM 259
Query: 363 GLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHV 542
LI+EM KGCSPDK+SYYTVM FLCK+ +I+EV+ L+EKM + NLL DQVTYN +H+
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHM 319
Query: 543 LSKHGHGD 566
LSKHGHGD
Sbjct: 320 LSKHGHGD 327
Score = 76.3 bits (186), Expect = 3e-12
Identities = 40/131 (30%), Positives = 76/131 (58%)
Frame = +3
Query: 168 MQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHR 347
++ + + PD NT +++L K ++AL FL + V Y+ ++ +C R
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360
Query: 348 IEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYN 527
++ A +++EM SKGC PD V+Y +V+ LC++ K+++ KK+L +M +H + V+Y
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM-YKHGCKPNTVSYT 419
Query: 528 NLIHVLSKHGH 560
L++ L K+G+
Sbjct: 420 ALLNGLCKNGN 430
Score = 74.7 bits (182), Expect = 1e-11
Identities = 48/153 (31%), Positives = 75/153 (49%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
+S +M F R G +A ++ M K G P N I L + K+++A RF+++
Sbjct: 453 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 512
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G +VV + +I G+C +E A+ L+ +M PD V+Y T++ L K +IE
Sbjct: 513 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572
Query: 459 EVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHG 557
E KL KM L+ VTY +IH + G
Sbjct: 573 EATKLAMKM-LRVGLIPTPVTYRTVIHQYCRMG 604
Score = 69.3 bits (168), Expect = 4e-10
Identities = 37/145 (25%), Positives = 75/145 (51%)
Frame = +3
Query: 123 SRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSV 302
S+ G+ +A++ L ++ D + ++ + +M+KA ++ M G +P V
Sbjct: 321 SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV 380
Query: 303 VTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEK 482
VTY +I G C +++ A ++ +M GC P+ VSY ++ LCK+ E ++++
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMM-N 439
Query: 483 MTTEHNLLHDQVTYNNLIHVLSKHG 557
M+ E + + +TY+ L+H + G
Sbjct: 440 MSEEDWWIPNAITYSVLMHGFRREG 464
Score = 67.0 bits (162), Expect = 2e-09
Identities = 39/129 (30%), Positives = 69/129 (53%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
F+ V+ F + ++ A+ +L M + PD+ T I L K ++E+A + +M
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
VG++P+ VTY +I YC + R+ED + L+ +M S+ + +Y V+ LC +E
Sbjct: 583 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLE 640
Query: 459 EVKKLLEKM 485
+ KLL K+
Sbjct: 641 QAYKLLGKV 649
Score = 63.5 bits (153), Expect = 2e-08
Identities = 45/158 (28%), Positives = 73/158 (46%)
Frame = +3
Query: 87 TPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFL 266
TP + ++ S + + +A + + G ++ T I+ + + +E AL L
Sbjct: 484 TPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL 543
Query: 267 DRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKD 446
D M L P VVTY +I RIE+A L +M G P V+Y TV+ C+
Sbjct: 544 DDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRM 603
Query: 447 NKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGH 560
++E++ KLLEKM + + YN +I L G+
Sbjct: 604 GRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGN 638
>emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 261 bits (668), Expect = 4e-68
Identities = 122/188 (64%), Positives = 151/188 (80%)
Frame = +3
Query: 3 MLEVLSKTKLCQGAKXXXXXXXXXXXXXTPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAG 182
MLE+LSKTKLCQGAK P+AF YVMVS+SRAG +R AM+ LT MQKAG
Sbjct: 140 MLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAG 199
Query: 183 IEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAI 362
IEPDL +CNTAI+VLV N+++KA+RFL+RMQ+V I P+V+TYNCLI+GYCD+HR+EDA
Sbjct: 200 IEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAX 259
Query: 363 GLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHV 542
LI+EM KGCSPDK+SYYTVM FLCK+ +I+E++ L+EKM + NLL DQVTYN +H+
Sbjct: 260 ELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHM 319
Query: 543 LSKHGHGD 566
LSKHGHGD
Sbjct: 320 LSKHGHGD 327
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/154 (28%), Positives = 85/154 (55%), Gaps = 2/154 (1%)
Frame = +3
Query: 105 YVMVSFSRAGNMRKAMQVLT--FMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
Y ++ F K +++L ++ + + PD NT +++L K ++AL FL +
Sbjct: 278 YTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAE 337
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
V Y+ ++ +C R++ A +++EM SKGC PD V+Y +V+ LC++ K++
Sbjct: 338 ERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVD 397
Query: 459 EVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGH 560
+ KK+L +M +H + V+Y L++ L K+G+
Sbjct: 398 QAKKMLRQM-YKHGCKPNTVSYTALLNGLCKNGN 430
Score = 72.4 bits (176), Expect = 5e-11
Identities = 47/153 (30%), Positives = 74/153 (48%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
+S +M F R G +A ++ M K G P N I L + K+++A RF+++
Sbjct: 453 YSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCL 512
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G +VV + +I G+C +E A+ L+ +M PD V+Y T++ L K +IE
Sbjct: 513 NNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572
Query: 459 EVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHG 557
E KL KM + VTY +IH + G
Sbjct: 573 EATKLAMKM-LRVGWIPTPVTYRTVIHQYCRMG 604
Score = 69.3 bits (168), Expect = 4e-10
Identities = 37/145 (25%), Positives = 75/145 (51%)
Frame = +3
Query: 123 SRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSV 302
S+ G+ +A++ L ++ D + ++ + +M+KA ++ M G +P V
Sbjct: 321 SKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDV 380
Query: 303 VTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEK 482
VTY +I G C +++ A ++ +M GC P+ VSY ++ LCK+ E ++++
Sbjct: 381 VTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMM-N 439
Query: 483 MTTEHNLLHDQVTYNNLIHVLSKHG 557
M+ E + + +TY+ L+H + G
Sbjct: 440 MSEEXWWIPNAITYSVLMHGFRREG 464
Score = 65.1 bits (157), Expect = 8e-09
Identities = 39/129 (30%), Positives = 68/129 (52%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
F+ V+ F + ++ A+ +L M + PD+ T I L K ++E+A + +M
Sbjct: 523 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 582
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
VG +P+ VTY +I YC + R+ED + L+ +M S+ + +Y V+ LC +E
Sbjct: 583 RVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLE 640
Query: 459 EVKKLLEKM 485
+ KLL K+
Sbjct: 641 QAYKLLGKV 649
Score = 63.2 bits (152), Expect = 3e-08
Identities = 45/158 (28%), Positives = 73/158 (46%)
Frame = +3
Query: 87 TPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFL 266
TP + ++ S + + +A + + G ++ T I+ + + +E AL L
Sbjct: 484 TPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLL 543
Query: 267 DRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKD 446
D M L P VVTY +I RIE+A L +M G P V+Y TV+ C+
Sbjct: 544 DDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRM 603
Query: 447 NKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGH 560
++E++ KLLEKM + + YN +I L G+
Sbjct: 604 GRVEDLLKLLEKMLSRQEC---RTAYNQVIEKLCSFGN 638
>ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528950|gb|EEF30943.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 737
Score = 258 bits (660), Expect = 4e-67
Identities = 123/188 (65%), Positives = 153/188 (81%)
Frame = +3
Query: 3 MLEVLSKTKLCQGAKXXXXXXXXXXXXXTPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAG 182
ML+VLSKTKLCQGA+ P+AF++VMVS+SRAG +R AMQVLT MQKAG
Sbjct: 142 MLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAG 201
Query: 183 IEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAI 362
+EP+L +CNTAI+VLV ANK+EKALRFL+RMQLVGI P+VVTYNCLI+GYCD++++E A+
Sbjct: 202 VEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAM 261
Query: 363 GLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHV 542
LI+EM KGC PDKVSYYTVM FLC+D +I+EV+ L+EKM ++ L DQVTYN L+H+
Sbjct: 262 ELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHM 321
Query: 543 LSKHGHGD 566
LSKHGH D
Sbjct: 322 LSKHGHAD 329
Score = 84.3 bits (207), Expect = 1e-14
Identities = 44/124 (35%), Positives = 73/124 (58%)
Frame = +3
Query: 189 PDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGL 368
PD NT +++L K ++AL FL + G V Y+ ++ +C R++ A +
Sbjct: 310 PDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEI 369
Query: 369 ISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLS 548
++EM +KGCSPD V+Y V+ LCK K+EE KK+L++M +H + V+Y L++ L
Sbjct: 370 VNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQM-YKHGCKPNTVSYTALLNGLC 428
Query: 549 KHGH 560
+HG+
Sbjct: 429 QHGN 432
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/145 (24%), Positives = 74/145 (51%)
Frame = +3
Query: 123 SRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSV 302
S+ G+ +A++ L ++ G + D + + +M++A ++ M G P V
Sbjct: 323 SKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDV 382
Query: 303 VTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEK 482
VTY ++ G C V ++E+A ++ +M GC P+ VSY ++ LC+ E ++++
Sbjct: 383 VTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMM-N 441
Query: 483 MTTEHNLLHDQVTYNNLIHVLSKHG 557
+ E + +TY+ ++H L + G
Sbjct: 442 TSEEDWWTPNAITYSVVMHGLRREG 466
Score = 64.3 bits (155), Expect = 1e-08
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Frame = +3
Query: 87 TPKAFSY--VMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALR 260
TP A +Y VM R G + +A V+ M G P N I L KM +A +
Sbjct: 449 TPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKK 508
Query: 261 FLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLC 440
F++ G + V + +I G+C I+ A+ L+ +M PD V++ ++ L
Sbjct: 509 FMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALG 568
Query: 441 KDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHG 557
K +IEE KM + L VTY +IH K G
Sbjct: 569 KKGRIEEATVYTMKM-LKKGLDPTPVTYRAVIHQYCKMG 606
Score = 61.6 bits (148), Expect = 8e-08
Identities = 34/132 (25%), Positives = 65/132 (49%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
+S ++ SF G M +A +++ M G PD+ + L K K+E+A + L +M
Sbjct: 350 YSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMY 409
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G P+ V+Y L+ G C +A +++ +P+ ++Y VM L ++ K+
Sbjct: 410 KHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLS 469
Query: 459 EVKKLLEKMTTE 494
E ++ +M T+
Sbjct: 470 EACDVVREMLTK 481
Score = 59.3 bits (142), Expect = 4e-07
Identities = 43/158 (27%), Positives = 69/158 (43%)
Frame = +3
Query: 87 TPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFL 266
TP + ++ S M +A + + G + T I+ +++ ++ AL L
Sbjct: 486 TPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLL 545
Query: 267 DRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKD 446
D M L P VT+ +I RIE+A +M KG P V+Y V+ CK
Sbjct: 546 DDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKM 605
Query: 447 NKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGH 560
++EE+ KLL KM + + YN +I L G+
Sbjct: 606 GRVEELIKLLGKMLSRSKC---RTAYNQVIEKLCNFGN 640
>ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 256 bits (654), Expect = 2e-66
Identities = 123/188 (65%), Positives = 147/188 (78%)
Frame = +3
Query: 3 MLEVLSKTKLCQGAKXXXXXXXXXXXXXTPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAG 182
ML+VLSKTKLCQGA+ P+AF YVMVS+SRAG +R A++VLT MQKAG
Sbjct: 206 MLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAG 265
Query: 183 IEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAI 362
+EP L +CNT IYVLVK K+EKAL+FL+RMQ+ GI P +VTYN LI+GYCD++RIEDA+
Sbjct: 266 VEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDAL 325
Query: 363 GLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHV 542
LI+ + SKGC PDKVSYYTVM FLCK+ KIEEVK L+EKM NL+ DQVTYN LIH+
Sbjct: 326 ELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHM 385
Query: 543 LSKHGHGD 566
LSKHGH D
Sbjct: 386 LSKHGHAD 393
Score = 75.9 bits (185), Expect = 4e-12
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
Frame = +3
Query: 141 RKAMQVLTFMQK----AGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSVVT 308
+K +V M+K + + PD NT I++L K + AL FL Q G V
Sbjct: 354 KKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVG 413
Query: 309 YNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEKMT 488
Y+ ++ +C R+++A L+ +M S+GC+PD V+Y ++ C+ +I+E KK+L++M
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQM- 472
Query: 489 TEHNLLHDQVTYNNLIHVLSKHG 557
+H + V+Y L++ L G
Sbjct: 473 YKHGCKPNTVSYTALLNGLCHSG 495
Score = 70.5 bits (171), Expect = 2e-10
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 2/162 (1%)
Frame = +3
Query: 87 TPKAFSY--VMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALR 260
TP A +Y VM R G + +A + M + G P N I L + K+ +A +
Sbjct: 513 TPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKK 572
Query: 261 FLDRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLC 440
+L+ G +VV + +I G+C + +E A+ ++ +M G PD V+Y + L
Sbjct: 573 YLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALG 632
Query: 441 KDNKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGHGD 566
K +++E +L+ KM ++ L VTY ++IH S+ G D
Sbjct: 633 KKGRLDEAAELIVKMLSK-GLDPTPVTYRSVIHRYSQWGRVD 673
Score = 69.7 bits (169), Expect = 3e-10
Identities = 39/145 (26%), Positives = 73/145 (50%)
Frame = +3
Query: 123 SRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQLVGIMPSV 302
S+ G+ A+ L Q G D + ++ + +M++A + M G P V
Sbjct: 387 SKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDV 446
Query: 303 VTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIEEVKKLLEK 482
VTY ++ G+C + RI++A ++ +M GC P+ VSY ++ LC K E ++++
Sbjct: 447 VTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMI-N 505
Query: 483 MTTEHNLLHDQVTYNNLIHVLSKHG 557
++ EH + +TY ++H L + G
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREG 530
Score = 63.2 bits (152), Expect = 3e-08
Identities = 38/129 (29%), Positives = 64/129 (49%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
F+ V+ F + G+M A+ VL M +G PD L K ++++A + +M
Sbjct: 589 FTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKML 648
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G+ P+ VTY +I Y R++D + L+ +M + P + Y V+ LC +E
Sbjct: 649 SKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLE 706
Query: 459 EVKKLLEKM 485
E +KLL K+
Sbjct: 707 EAEKLLGKV 715
Score = 58.5 bits (140), Expect = 7e-07
Identities = 44/158 (27%), Positives = 71/158 (44%)
Frame = +3
Query: 87 TPKAFSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFL 266
TP + ++ S + + +A + L G ++ T I+ + ME AL L
Sbjct: 550 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 609
Query: 267 DRMQLVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKD 446
D M L G P VTY L R+++A LI +M SKG P V+Y +V+ +
Sbjct: 610 DDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQW 669
Query: 447 NKIEEVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKHGH 560
+++++ LLEKM + YN +I L G+
Sbjct: 670 GRVDDMLNLLEKMLKRQPF---RTVYNQVIEKLCDFGN 704
Score = 56.2 bits (134), Expect = 4e-06
Identities = 37/152 (24%), Positives = 70/152 (46%)
Frame = +3
Query: 99 FSYVMVSFSRAGNMRKAMQVLTFMQKAGIEPDLDVCNTAIYVLVKANKMEKALRFLDRMQ 278
+S ++ SF + G M +A ++ M G PD+ + + ++++A + L +M
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473
Query: 279 LVGIMPSVVTYNCLIRGYCDVHRIEDAIGLISEMASKGCSPDKVSYYTVMAFLCKDNKIE 458
G P+ V+Y L+ G C + +A +I+ +P+ ++Y VM L ++ K+
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLS 533
Query: 459 EVKKLLEKMTTEHNLLHDQVTYNNLIHVLSKH 554
E L +M E V N LI L ++
Sbjct: 534 EACDLTREM-VEKGFFPTPVEINLLIQSLCQN 564