BLASTX nr result

ID: Bupleurum21_contig00034426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034426
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm...   199   3e-49
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
           gi|223545812|gb|EEF47316.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score =  199 bits (505), Expect = 3e-49
 Identities = 89/138 (64%), Positives = 115/138 (83%)
 Frame = +1

Query: 43  LGYIPKLDFPKFDGSSPRLWIKKCFKYFNLCKIPEDQRVDLASLNMIDKAETWISSYLSI 222
           LGYIPKL FPKFDGS+ R WIKKC KYF  CKIP+ Q+VDLASLNM+DKAE W+SSYL  
Sbjct: 29  LGYIPKLKFPKFDGSNLRQWIKKCCKYFVFCKIPDKQKVDLASLNMVDKAENWVSSYLIN 88

Query: 223 RKQVEWNDFVIDLTARFKDDTGNNVVEQFNKLYQIDSLETYIDDFEHLRSIMMQANSILP 402
           R  V+WNDFVID+ +RFKD++G NVVE+FNKL Q +SLE YID+FE ++S M+Q + +LP
Sbjct: 89  RTAVDWNDFVIDVNSRFKDESGINVVEEFNKLQQTNSLEDYIDEFEKVKSSMLQNSYVLP 148

Query: 403 DSYILDSFIGGLKPAVKP 456
           + ++++SF+GGLKP ++P
Sbjct: 149 EKHLMESFVGGLKPGIRP 166


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  111 bits (277), Expect = 7e-23
 Identities = 54/135 (40%), Positives = 84/135 (62%), Gaps = 1/135 (0%)
 Frame = +1

Query: 55  PKLDFPKFDGSSPRLWIKKCFKYFNLCKIPEDQRVDLASLNMIDKAETWISSYL-SIRKQ 231
           P++D   F G +PR W+++C K+F L   P  Q V++ASL +  KAE W   Y+  +   
Sbjct: 104 PRMDLTTFRGDNPRGWLRRCNKFFKLNATPWQQWVEIASLYLEGKAEIWFEGYMCGLDVS 163

Query: 232 VEWNDFVIDLTARFKDDTGNNVVEQFNKLYQIDSLETYIDDFEHLRSIMMQANSILPDSY 411
           +EW +F   + +RF   + +++VE+FNKL Q   +E Y++ FE L+S+M   N +LP+SY
Sbjct: 164 LEWEEFSKAICSRF--GSRDDIVEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESY 221

Query: 412 ILDSFIGGLKPAVKP 456
            + SFI GLK  +KP
Sbjct: 222 YISSFISGLKEDIKP 236


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
 Frame = +1

Query: 52  IPKLDFPKFDGSSPRLWIKKCFKYFNLCKIPEDQRVDLASLNMIDKAETWISSYL-SIRK 228
           +P++D   F G +PR W+++C K+F L   P  + V+LASL +  KAE W   Y+  +  
Sbjct: 52  LPRMDLTTFWGDNPRGWLRRCKKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEG 111

Query: 229 QVEWNDFVIDLTARFKDDTGNNVVEQFNKLYQIDSLETYIDDFEHLRSIMMQANSILPDS 408
            V+W  F   +  RF + T   +VE+FNKL Q   ++ Y++ FE L+S+M   NS+LP+S
Sbjct: 112 VVDWEKFSGAICNRFGNRTA--IVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPES 169

Query: 409 YILDSFIGGLKPAVKP 456
           Y + SFI GLK  +KP
Sbjct: 170 YYISSFISGLKEDIKP 185


>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
 Frame = +1

Query: 52  IPKLDFPKFDGSSPRLWIKKCFKYFNLCKIPEDQRVDLASLNMIDKAETWISSYL-SIRK 228
           +P+++   F G  PR W++KC KYF +  IP  Q +++ S  +  KA+ W    +     
Sbjct: 15  LPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDS 74

Query: 229 QVEWNDFVIDLTARF--KDDTGNNVVEQFNKLYQIDSLETYIDDFEHLRSIMMQANSILP 402
            +EW +F  DL  RF  KDD    +VE+FNKL Q ++++ YI+ FE LRS+M   N +LP
Sbjct: 75  LIEWEEFSQDLCRRFGSKDD----IVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLP 130

Query: 403 DSYILDSFIGGLKPAVKP 456
           ++Y + SFI GLK  +KP
Sbjct: 131 EAYYVSSFISGLKDEIKP 148


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/138 (39%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
 Frame = +1

Query: 52  IPKLDFPKFDGSSPRLWIKKCFKYFNLCKIPEDQRVDLASLNMIDKAETWISSYL-SIRK 228
           +P+++   F G  PR W++KC KYF +  IP  Q +++ S  +  KA+ W    +     
Sbjct: 15  LPRMELSTFRGEDPRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDS 74

Query: 229 QVEWNDFVIDLTARF--KDDTGNNVVEQFNKLYQIDSLETYIDDFEHLRSIMMQANSILP 402
            +EW +F  DL  RF  KDD    +VE+FNKL Q ++++ YI+ FE LRS+M   N +LP
Sbjct: 75  LIEWEEFSQDLCRRFGSKDD----IVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLP 130

Query: 403 DSYILDSFIGGLKPAVKP 456
           ++Y + SFI GLK  +KP
Sbjct: 131 EAYYVSSFISGLKDEIKP 148


Top