BLASTX nr result
ID: Bupleurum21_contig00034424
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00034424 (422 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|1... 62 5e-08 gb|ABK93470.1| unknown [Populus trichocarpa] 62 6e-08 ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|1... 62 6e-08 gb|AAS20966.1| 60s acidic ribosomal protein [Hyacinthus orientalis] 59 3e-07 ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ... 59 5e-07 >ref|XP_002313663.1| predicted protein [Populus trichocarpa] gi|118484510|gb|ABK94130.1| unknown [Populus trichocarpa] gi|118485202|gb|ABK94462.1| unknown [Populus trichocarpa] gi|118487376|gb|ABK95516.1| unknown [Populus trichocarpa] gi|118488119|gb|ABK95879.1| unknown [Populus trichocarpa] gi|222850071|gb|EEE87618.1| predicted protein [Populus trichocarpa] Length = 113 Score = 62.0 bits (149), Expect = 5e-08 Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 3/86 (3%) Frame = -2 Query: 421 GSVGADASDEMIELLLSSVKGKDVSELIASGREKMALALSCSXXXXXXGXXXXXXXXXXX 242 GSVGADA D+ IELLLSSVKGKD++ELIASGREK+A S G Sbjct: 28 GSVGADADDDRIELLLSSVKGKDITELIASGREKLASVPSGGGVAVSAGAAPAAAGGAAP 87 Query: 241 XXXXXVDQAA---EESDDDPIRNLFD 173 ++ EESDDD +LFD Sbjct: 88 AAEAKKEEKVEEKEESDDDMGFSLFD 113 >gb|ABK93470.1| unknown [Populus trichocarpa] Length = 114 Score = 61.6 bits (148), Expect = 6e-08 Identities = 30/36 (83%), Positives = 34/36 (94%) Frame = -2 Query: 421 GSVGADASDEMIELLLSSVKGKDVSELIASGREKMA 314 GSVGADA D+ IELLLSSVKGKD++ELIASGREK+A Sbjct: 28 GSVGADADDDRIELLLSSVKGKDITELIASGREKLA 63 >ref|XP_002328062.1| predicted protein [Populus trichocarpa] gi|118481307|gb|ABK92597.1| unknown [Populus trichocarpa] gi|118485702|gb|ABK94701.1| unknown [Populus trichocarpa] gi|222837577|gb|EEE75942.1| predicted protein [Populus trichocarpa] Length = 114 Score = 61.6 bits (148), Expect = 6e-08 Identities = 30/36 (83%), Positives = 34/36 (94%) Frame = -2 Query: 421 GSVGADASDEMIELLLSSVKGKDVSELIASGREKMA 314 GSVGADA D+ IELLLSSVKGKD++ELIASGREK+A Sbjct: 28 GSVGADADDDRIELLLSSVKGKDITELIASGREKLA 63 >gb|AAS20966.1| 60s acidic ribosomal protein [Hyacinthus orientalis] Length = 114 Score = 59.3 bits (142), Expect = 3e-07 Identities = 29/36 (80%), Positives = 32/36 (88%) Frame = -2 Query: 421 GSVGADASDEMIELLLSSVKGKDVSELIASGREKMA 314 GSVGADA D+ IELLLS VKGKD++ELIASGREK A Sbjct: 28 GSVGADAEDDRIELLLSEVKGKDITELIASGREKFA 63 >ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera] gi|297740089|emb|CBI30271.3| unnamed protein product [Vitis vinifera] Length = 114 Score = 58.5 bits (140), Expect = 5e-07 Identities = 28/36 (77%), Positives = 33/36 (91%) Frame = -2 Query: 421 GSVGADASDEMIELLLSSVKGKDVSELIASGREKMA 314 GSVGA+A D+ IELLLS VKGKD++ELIASGREK+A Sbjct: 28 GSVGAEADDDRIELLLSEVKGKDITELIASGREKLA 63