BLASTX nr result

ID: Bupleurum21_contig00034394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034394
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]    59   5e-10
emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]    55   8e-06

>emb|CAN76196.1| hypothetical protein VITISV_041073 [Vitis vinifera]
          Length = 1505

 Score = 59.3 bits (142), Expect(2) = 5e-10
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = +2

Query: 86  DTKKDSVLYQKREEND*VCVFLDGLNQELNEVRGRILGRKSLPSLTD 226
           D   DSV ++KREEND V VFL  LN  L+EVRGRILGRK LPS+ +
Sbjct: 164 DCPNDSVRHKKREENDRVYVFLAALNHNLDEVRGRILGRKPLPSIRE 210



 Score = 29.3 bits (64), Expect(2) = 5e-10
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +1

Query: 244 EEESHEKLKILPLFRKGASTKEKKRKKPWCD 336
           E  S+ +++   L  KG+     +RKKPWCD
Sbjct: 230 EPMSNPEIESSALVSKGSDLDGDRRKKPWCD 260


>emb|CAN62636.1| hypothetical protein VITISV_006313 [Vitis vinifera]
          Length = 1246

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 30/48 (62%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
 Frame = +2

Query: 86  DTKKDSVLYQKREEND*VC-VFLDGLNQELNEVRGRILGRKSLPSLTD 226
           D   DSV ++KREEND V  VFL GLN  L+EVRG ILGRK LPS+ +
Sbjct: 152 DCPNDSVRHKKREENDXVYYVFLAGLNHNLDEVRGXILGRKPLPSIRE 199


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