BLASTX nr result

ID: Bupleurum21_contig00034391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034391
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...   262   2e-68
ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   253   1e-65
ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|2...   252   2e-65
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho...   248   4e-64
ref|XP_004166815.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...   241   4e-62

>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
           communis] gi|223551394|gb|EEF52880.1| brca1 interacting
           protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score =  262 bits (670), Expect = 2e-68
 Identities = 129/166 (77%), Positives = 143/166 (86%)
 Frame = -3

Query: 502 EIADLSLSVILTSGTLSPMLSFSSELGVQFGTCLEAPHVIDVESQVWAAVISCGPGNYPL 323
           +IADLSLSVILTSGTLSPM SFSSELGVQFGTCLEAPHVID ESQVWAAVIS GP NYPL
Sbjct: 472 DIADLSLSVILTSGTLSPMNSFSSELGVQFGTCLEAPHVIDNESQVWAAVISTGPDNYPL 531

Query: 322 NASYKTAESFAFQDSLGSSLEEICKIVPAGCLVFFPSYKLMDKLSSRWRETGQWSRLNAQ 143
           NASYKTA+ FAFQD+LG +LEEIC IVPAG LVFFPSYKLM+KL +RWRETGQWSRLNA+
Sbjct: 532 NASYKTADEFAFQDALGKTLEEICMIVPAGSLVFFPSYKLMEKLCNRWRETGQWSRLNAK 591

Query: 142 KSLFVEPRGGNQDDFDDTLRGYYNSIGLCGKCDTGRKRKSKNLGLK 5
           KSLFVEPRG  +++FD  L+GYY+SI  C     GRK++ K L LK
Sbjct: 592 KSLFVEPRGSQEEEFDSVLKGYYDSICKCNTHAVGRKKRVKRLDLK 637


>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  253 bits (646), Expect = 1e-65
 Identities = 123/164 (75%), Positives = 140/164 (85%)
 Frame = -3

Query: 499 IADLSLSVILTSGTLSPMLSFSSELGVQFGTCLEAPHVIDVESQVWAAVISCGPGNYPLN 320
           IADLSLSVILTSGTLSPM SFSSELGVQFGTCLEAPHVID+ESQ+WAA+ S  PGNYPLN
Sbjct: 467 IADLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPHVIDIESQLWAAIFSTSPGNYPLN 526

Query: 319 ASYKTAESFAFQDSLGSSLEEICKIVPAGCLVFFPSYKLMDKLSSRWRETGQWSRLNAQK 140
           ASYKTA+++AFQD+LG SLEEI KIVP G LVFFPSYKLM+KL SRWRETGQWS+LN QK
Sbjct: 527 ASYKTADAYAFQDALGKSLEEIFKIVPGGTLVFFPSYKLMEKLCSRWRETGQWSQLNEQK 586

Query: 139 SLFVEPRGGNQDDFDDTLRGYYNSIGLCGKCDTGRKRKSKNLGL 8
            LF+EPRGG+QDDF+  L+ YY S+    K   GRKR++K + L
Sbjct: 587 FLFIEPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRTKKMDL 630


>ref|XP_002300637.1| predicted protein [Populus trichocarpa] gi|222842363|gb|EEE79910.1|
           predicted protein [Populus trichocarpa]
          Length = 1183

 Score =  252 bits (643), Expect = 2e-65
 Identities = 125/163 (76%), Positives = 140/163 (85%)
 Frame = -3

Query: 502 EIADLSLSVILTSGTLSPMLSFSSELGVQFGTCLEAPHVIDVESQVWAAVISCGPGNYPL 323
           +IADLSLSVILTSGTLSPM SFSSELGVQFGTCLEAPHV+DVESQV  +VIS  P NYPL
Sbjct: 468 DIADLSLSVILTSGTLSPMNSFSSELGVQFGTCLEAPHVVDVESQVCVSVISTSPDNYPL 527

Query: 322 NASYKTAESFAFQDSLGSSLEEICKIVPAGCLVFFPSYKLMDKLSSRWRETGQWSRLNAQ 143
           NASYKTA+ + FQD+LG SLEEICKIVPAG LVFFPSYKLM+KLS+RWRETGQWSRLNA+
Sbjct: 528 NASYKTADCYTFQDALGKSLEEICKIVPAGSLVFFPSYKLMEKLSNRWRETGQWSRLNAR 587

Query: 142 KSLFVEPRGGNQDDFDDTLRGYYNSIGLCGKCDTGRKRKSKNL 14
           K LFVEPRGG+Q+DFD  L+GYY+ I    +   GRKRK K +
Sbjct: 588 KPLFVEPRGGSQEDFDSILKGYYDCIRRDKRPALGRKRKVKKV 630


>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
          Length = 1239

 Score =  248 bits (633), Expect = 4e-64
 Identities = 122/163 (74%), Positives = 137/163 (84%)
 Frame = -3

Query: 502 EIADLSLSVILTSGTLSPMLSFSSELGVQFGTCLEAPHVIDVESQVWAAVISCGPGNYPL 323
           +I+DLSLSVILTSGTLSPM SFSSELGVQFGT LEAPHVIDVESQVW AVIS GPGNYPL
Sbjct: 477 DISDLSLSVILTSGTLSPMNSFSSELGVQFGTSLEAPHVIDVESQVWPAVISTGPGNYPL 536

Query: 322 NASYKTAESFAFQDSLGSSLEEICKIVPAGCLVFFPSYKLMDKLSSRWRETGQWSRLNAQ 143
           N SYKTA+ +AFQD+LG SLEEI  I P GCLVFFPSYKLM+KL +RW ETGQWSRLNA+
Sbjct: 537 NGSYKTADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLQNRWSETGQWSRLNAR 596

Query: 142 KSLFVEPRGGNQDDFDDTLRGYYNSIGLCGKCDTGRKRKSKNL 14
           KSLFVEPRGG Q+DFD  L+GYY++I L      G+K + K +
Sbjct: 597 KSLFVEPRGGAQEDFDSILKGYYDTIRLGDNFAIGKKSRGKKV 639


>ref|XP_004166815.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
           homolog [Cucumis sativus]
          Length = 1041

 Score =  241 bits (615), Expect = 4e-62
 Identities = 119/159 (74%), Positives = 134/159 (84%)
 Frame = -3

Query: 502 EIADLSLSVILTSGTLSPMLSFSSELGVQFGTCLEAPHVIDVESQVWAAVISCGPGNYPL 323
           +I DLSLSVILTSGTLSP+ SFSSELGV+FGT LEAPHVIDVESQVW A+IS GPGNYPL
Sbjct: 483 DIGDLSLSVILTSGTLSPLNSFSSELGVRFGTSLEAPHVIDVESQVWPAIISIGPGNYPL 542

Query: 322 NASYKTAESFAFQDSLGSSLEEICKIVPAGCLVFFPSYKLMDKLSSRWRETGQWSRLNAQ 143
           NASYKTA+ +AFQD+LG SLEEI  I P GCLVFFPSYKLM+KL +RW ETGQWSRLNA+
Sbjct: 543 NASYKTADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLRNRWSETGQWSRLNAR 602

Query: 142 KSLFVEPRGGNQDDFDDTLRGYYNSIGLCGKCDTGRKRK 26
           KSLFVEP GG Q+DFD  L+GYY++I L      G+K K
Sbjct: 603 KSLFVEPCGGAQEDFDSILKGYYDTIRLGDNFAVGKKVK 641


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