BLASTX nr result

ID: Bupleurum21_contig00034389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034389
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   121   7e-26
ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thalia...   121   7e-26
emb|CAB72176.1| putative protein [Arabidopsis thaliana]               121   7e-26
ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   119   3e-25
ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. l...   119   3e-25

>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
           gi|332646086|gb|AEE79607.1| condensin complex subunit 1
           [Arabidopsis thaliana]
          Length = 1415

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/109 (58%), Positives = 74/109 (67%)
 Frame = +1

Query: 1   QELFDRVYSLVKNFATLTPSCKSNLVESLRSNFSVLLPNXXXXXXXXXXXXXXXXXXXXX 180
           Q++FDRVYSLV++F +L PSCK NLVESLRSN SVLLPN                     
Sbjct: 62  QDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQEDDVPIIDR- 120

Query: 181 IASHRNAFKIYTFFLIQVVLAEESKVSSNHTTKVAASSRKKQLVNSWNW 327
           I SHRNA KIYTFFL+ VV+ EES +SS  TTKVAA  RKKQ++ SWNW
Sbjct: 121 ITSHRNALKIYTFFLLTVVMNEESHISSVETTKVAARGRKKQIIQSWNW 169


>ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thaliana]
           gi|332646085|gb|AEE79606.1| condensin complex subunit 1
           [Arabidopsis thaliana]
          Length = 1396

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/109 (58%), Positives = 74/109 (67%)
 Frame = +1

Query: 1   QELFDRVYSLVKNFATLTPSCKSNLVESLRSNFSVLLPNXXXXXXXXXXXXXXXXXXXXX 180
           Q++FDRVYSLV++F +L PSCK NLVESLRSN SVLLPN                     
Sbjct: 62  QDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQEDDVPIIDR- 120

Query: 181 IASHRNAFKIYTFFLIQVVLAEESKVSSNHTTKVAASSRKKQLVNSWNW 327
           I SHRNA KIYTFFL+ VV+ EES +SS  TTKVAA  RKKQ++ SWNW
Sbjct: 121 ITSHRNALKIYTFFLLTVVMNEESHISSVETTKVAARGRKKQIIQSWNW 169


>emb|CAB72176.1| putative protein [Arabidopsis thaliana]
          Length = 1439

 Score =  121 bits (303), Expect = 7e-26
 Identities = 64/109 (58%), Positives = 74/109 (67%)
 Frame = +1

Query: 1   QELFDRVYSLVKNFATLTPSCKSNLVESLRSNFSVLLPNXXXXXXXXXXXXXXXXXXXXX 180
           Q++FDRVYSLV++F +L PSCK NLVESLRSN SVLLPN                     
Sbjct: 62  QDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQEDDVPIIDR- 120

Query: 181 IASHRNAFKIYTFFLIQVVLAEESKVSSNHTTKVAASSRKKQLVNSWNW 327
           I SHRNA KIYTFFL+ VV+ EES +SS  TTKVAA  RKKQ++ SWNW
Sbjct: 121 ITSHRNALKIYTFFLLTVVMNEESHISSVETTKVAARGRKKQIIQSWNW 169


>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/109 (56%), Positives = 74/109 (67%)
 Frame = +1

Query: 1   QELFDRVYSLVKNFATLTPSCKSNLVESLRSNFSVLLPNXXXXXXXXXXXXXXXXXXXXX 180
           Q++FDRVYSL+K F+TLTPSCK NLVESLRSN SVLLPN                     
Sbjct: 61  QDVFDRVYSLIKGFSTLTPSCKLNLVESLRSNLSVLLPN-VDSLSRVSQDHADDVPILDR 119

Query: 181 IASHRNAFKIYTFFLIQVVLAEESKVSSNHTTKVAASSRKKQLVNSWNW 327
           +ASHRNAFKIYTFFL+ ++L EES +  N  +K   SSRKKQ ++SWNW
Sbjct: 120 VASHRNAFKIYTFFLLNIILIEESNIGVN-KSKATLSSRKKQPIHSWNW 167


>ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323969|gb|EFH54390.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1325

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/109 (55%), Positives = 74/109 (67%)
 Frame = +1

Query: 1   QELFDRVYSLVKNFATLTPSCKSNLVESLRSNFSVLLPNXXXXXXXXXXXXXXXXXXXXX 180
           Q++FDRVYSLV++F +L PSCK NLVESLRSN SVLLPN                     
Sbjct: 62  QDVFDRVYSLVRSFFSLPPSCKCNLVESLRSNLSVLLPNVDSISRSVQDQEDDVPIIDR- 120

Query: 181 IASHRNAFKIYTFFLIQVVLAEESKVSSNHTTKVAASSRKKQLVNSWNW 327
           I SHRNA KIYTFFL+ +++ EES +SS  +TKVAA  RKKQ++ SWNW
Sbjct: 121 ITSHRNALKIYTFFLLTIIMTEESHISSVDSTKVAARGRKKQVIQSWNW 169


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