BLASTX nr result

ID: Bupleurum21_contig00034376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034376
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containi...    62   5e-08
emb|CBI30711.3| unnamed protein product [Vitis vinifera]               62   5e-08

>ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -3

Query: 284 MLSICKTFPQFLHTPYIYNHRKQSFKHQNDSPIFKPFTKIS-PSSNTNKYCPKLSVSLSL 108
           ML I KT P    +P    HR+ S  + N    F+P +K    SSN    C  +  S+  
Sbjct: 1   MLLISKTTPNLWVSPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLP 60

Query: 107 TNTKNHQIIDYNVEILEACELGNLKQAMNLFSQS 6
           + T + +I DYN+EI   CELGNL++AM L +QS
Sbjct: 61  SETIDCKITDYNIEICRFCELGNLRRAMELINQS 94


>emb|CBI30711.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = -3

Query: 284 MLSICKTFPQFLHTPYIYNHRKQSFKHQNDSPIFKPFTKIS-PSSNTNKYCPKLSVSLSL 108
           ML I KT P    +P    HR+ S  + N    F+P +K    SSN    C  +  S+  
Sbjct: 1   MLLISKTTPNLWVSPPHQIHRENSLTYPNGFIFFRPSSKTPLVSSNLYHSCATIGTSVLP 60

Query: 107 TNTKNHQIIDYNVEILEACELGNLKQAMNLFSQS 6
           + T + +I DYN+EI   CELGNL++AM L +QS
Sbjct: 61  SETIDCKITDYNIEICRFCELGNLRRAMELINQS 94


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