BLASTX nr result

ID: Bupleurum21_contig00034370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034370
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein ...    64   1e-08
ref|XP_002520639.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|XP_002330880.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002313473.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002880120.1| hypothetical protein ARALYDRAFT_483577 [Arab...    56   3e-06

>ref|XP_002266606.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|297736200|emb|CBI24838.3| unnamed protein
           product [Vitis vinifera]
          Length = 536

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/70 (52%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
 Frame = +3

Query: 78  KMKKQSYISVPSQFINXXXXXXXXXXXXXPKKCSRQSR--FN-LFKNPRFYFSLIFLFGF 248
           K KK SYISVPSQ IN             PKK SR S   F+ LFKNPR +F   FLFGF
Sbjct: 3   KSKKVSYISVPSQIINSLSSSSLQSLLVSPKKSSRSSSKFFSFLFKNPRLWFLAFFLFGF 62

Query: 249 LGMLKMWYNI 278
           + MLKM +N+
Sbjct: 63  IAMLKMGFNL 72


>ref|XP_002520639.1| conserved hypothetical protein [Ricinus communis]
           gi|223540159|gb|EEF41735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 589

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = +3

Query: 84  KKQSYISVPSQFINXXXXXXXXXXXXXPKKCSRQSRFN--LFKNPRFYFSLIFLFGFLGM 257
           KK SYISVPSQ IN             PKK SR    N  LFK+P+ +F  +F+FGFLGM
Sbjct: 9   KKVSYISVPSQVINSLSSSSLQTLLLSPKKPSRNKFLNWSLFKSPKVWFFALFIFGFLGM 68

Query: 258 LKMWYNI 278
           L++W+++
Sbjct: 69  LRLWFDL 75


>ref|XP_002330880.1| predicted protein [Populus trichocarpa] gi|222872702|gb|EEF09833.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +3

Query: 84  KKQSYISVPSQFINXXXXXXXXXXXXXPKKCSRQSRFNL--FKNPRFYFSLIFLFGFLGM 257
           KK SYISVPSQ IN             PKK S    F L  F++PRF+F  +FL GFLG 
Sbjct: 3   KKVSYISVPSQIINSLSSSSLQSLLLSPKKPSANRFFGLNWFRSPRFWFLALFLCGFLGT 62

Query: 258 LKMWYNI 278
           LK+WY +
Sbjct: 63  LKLWYTL 69


>ref|XP_002313473.1| predicted protein [Populus trichocarpa] gi|222849881|gb|EEE87428.1|
           predicted protein [Populus trichocarpa]
          Length = 570

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/67 (49%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
 Frame = +3

Query: 84  KKQSYISVPSQFINXXXXXXXXXXXXXPKKCSRQSRFNL--FKNPRFYFSLIFLFGFLGM 257
           KK SYISVPSQ IN             PKK S    F L  F++PRF+F  +FL GFLG 
Sbjct: 9   KKVSYISVPSQIINSLSSSSLQSLLIPPKKPSANRFFGLKWFRSPRFWFLALFLCGFLGT 68

Query: 258 LKMWYNI 278
           LK+WY +
Sbjct: 69  LKLWYTL 75


>ref|XP_002880120.1| hypothetical protein ARALYDRAFT_483577 [Arabidopsis lyrata subsp.
           lyrata] gi|297325959|gb|EFH56379.1| hypothetical protein
           ARALYDRAFT_483577 [Arabidopsis lyrata subsp. lyrata]
          Length = 576

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
 Frame = +3

Query: 63  NNTIKKMKKQSYISVPSQFINXXXXXXXXXXXXXPKKCSRQ-SRFNL-FKNPRFYFSLIF 236
           N++    KK SYISVPSQ IN             PKK SR  +RF+  ++NPR +F  +F
Sbjct: 8   NSSSSNKKKVSYISVPSQIINSLSSSSLQSLLVSPKKSSRSINRFSFSYRNPRIWFFTLF 67

Query: 237 LFGFLGMLKMWYNI 278
           L    GMLK+ +N+
Sbjct: 68  LVSLFGMLKLGFNV 81


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