BLASTX nr result

ID: Bupleurum21_contig00034364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034364
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24134.3| unnamed protein product [Vitis vinifera]               39   4e-06
ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vi...    39   4e-06
ref|XP_004139916.1| PREDICTED: protein strawberry notch-like [Cu...    37   8e-06

>emb|CBI24134.3| unnamed protein product [Vitis vinifera]
          Length = 1294

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = -2

Query: 226 LRIQMDLESSKALSCLQIETLICFAGRR*WWWCCERNIYQL 104
           L+I+ DLESS ALSCLQIETL+         + C+R+++ L
Sbjct: 205 LKIKDDLESSNALSCLQIETLV---------YACQRHLHHL 236



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = -1

Query: 359 QEEDSGGVVVRETFTNYCLPKLSIAFL---I*VERASLSAVQPHE 234
           +EED GG+V  ETFT+Y  PKLSI        VE +SLSAVQP E
Sbjct: 157 REEDEGGMV-GETFTDYRPPKLSIGPPHPDHVVETSSLSAVQPPE 200


>ref|XP_003634816.1| PREDICTED: protein strawberry notch-like [Vitis vinifera]
          Length = 1242

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = -2

Query: 226 LRIQMDLESSKALSCLQIETLICFAGRR*WWWCCERNIYQL 104
           L+I+ DLESS ALSCLQIETL+         + C+R+++ L
Sbjct: 186 LKIKDDLESSNALSCLQIETLV---------YACQRHLHHL 217



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = -1

Query: 359 QEEDSGGVVVRETFTNYCLPKLSIAFL---I*VERASLSAVQPHE 234
           +EED GG+V  ETFT+Y  PKLSI        VE +SLSAVQP E
Sbjct: 138 REEDEGGMV-GETFTDYRPPKLSIGPPHPDHVVETSSLSAVQPPE 181


>ref|XP_004139916.1| PREDICTED: protein strawberry notch-like [Cucumis sativus]
          Length = 1267

 Score = 37.4 bits (85), Expect(2) = 8e-06
 Identities = 26/45 (57%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
 Frame = -1

Query: 359 QEEDSGGVVVRETFTNYCLPKLSIAFL---I*VERASLSAVQPHE 234
           +EED GG V  ETFT Y  PKLSI  L     VE +SL+AVQP E
Sbjct: 163 REEDEGGTV-GETFTEYHPPKLSIGPLHPDPVVETSSLAAVQPPE 206



 Score = 37.0 bits (84), Expect(2) = 8e-06
 Identities = 19/28 (67%), Positives = 24/28 (85%)
 Frame = -2

Query: 226 LRIQMDLESSKALSCLQIETLICFAGRR 143
           L+I+ DLE SKALSCLQIETL+ +A +R
Sbjct: 211 LKIKDDLEKSKALSCLQIETLV-YASQR 237


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