BLASTX nr result

ID: Bupleurum21_contig00034355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034355
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|2...   219   3e-55
ref|XP_002516227.1| conserved hypothetical protein [Ricinus comm...   214   8e-54
ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vi...   204   6e-51
emb|CBI29601.3| unnamed protein product [Vitis vinifera]              204   6e-51
ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like p...   203   2e-50

>ref|XP_002326302.1| predicted protein [Populus trichocarpa] gi|222833495|gb|EEE71972.1|
           predicted protein [Populus trichocarpa]
          Length = 1029

 Score =  219 bits (557), Expect = 3e-55
 Identities = 115/187 (61%), Positives = 136/187 (72%)
 Frame = +2

Query: 2   DKLGGNSSYLLRKTLASLAVIQKKPDNDFPYRKQLDECLGSALVALGPETFLSLLPLNLE 181
           DKLG  SSY +R TL +LA +Q+ PD DFPYRKQL E LGSAL A+GPETFLS LPL LE
Sbjct: 188 DKLGNYSSYFMRGTLKNLADMQRLPDEDFPYRKQLHESLGSALGAMGPETFLSFLPLKLE 247

Query: 182 AQDLSQVNTRLFPILKQYTIGSSLNFFTESIFDTIGLMTKKSVAHEQEGRILSARSVDRL 361
             DLS+VN  LFPILKQYT+G+ L+FFTES+   +GL+ KKS   E +GRI+SARS D L
Sbjct: 248 VDDLSEVNVWLFPILKQYTVGARLSFFTESVLSMVGLIKKKSRQLELDGRIISARSADAL 307

Query: 362 VNSLWSLLPSFCNYPVDMADSFKDLVKALYVPLREEQAIRGXXXXXXXXXXQQNKKILEG 541
           V SLWSLLPSFCNYP+D A+SF+DL KAL   L EE  IRG          QQNK+I+E 
Sbjct: 308 VYSLWSLLPSFCNYPLDTAESFQDLEKALCGALSEECDIRGIVCSALQVLIQQNKRIMEE 367

Query: 542 NADISGT 562
             D++ T
Sbjct: 368 QDDLTVT 374


>ref|XP_002516227.1| conserved hypothetical protein [Ricinus communis]
           gi|223544713|gb|EEF46229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1233

 Score =  214 bits (545), Expect = 8e-54
 Identities = 109/182 (59%), Positives = 134/182 (73%)
 Frame = +2

Query: 5   KLGGNSSYLLRKTLASLAVIQKKPDNDFPYRKQLDECLGSALVALGPETFLSLLPLNLEA 184
           KLG +SSY ++ T+ +LA +++  D+DFPYRKQL ECLGSAL A+GPETFL+LLPL +EA
Sbjct: 380 KLGNHSSYFMKGTVKNLADMERLSDDDFPYRKQLHECLGSALGAMGPETFLNLLPLKIEA 439

Query: 185 QDLSQVNTRLFPILKQYTIGSSLNFFTESIFDTIGLMTKKSVAHEQEGRILSARSVDRLV 364
            DLS+VN  LFPILKQYT+G+ L+FFTE++   IG M KKS   EQEGR++SAR+ D L+
Sbjct: 440 NDLSEVNVWLFPILKQYTVGAQLSFFTETVLGMIGHMRKKSQKFEQEGRVVSARNADALI 499

Query: 365 NSLWSLLPSFCNYPVDMADSFKDLVKALYVPLREEQAIRGXXXXXXXXXXQQNKKILEGN 544
            SLWSLLPSFCNYP+D A+SFKDL + L   LREE  I G          QQNKK  E N
Sbjct: 500 YSLWSLLPSFCNYPLDTAESFKDLQQVLCSALREEHDICGIICSALQILIQQNKKNAEEN 559

Query: 545 AD 550
            D
Sbjct: 560 DD 561


>ref|XP_002267256.2| PREDICTED: RRP12-like protein-like [Vitis vinifera]
          Length = 1439

 Score =  204 bits (520), Expect = 6e-51
 Identities = 107/187 (57%), Positives = 132/187 (70%)
 Frame = +2

Query: 2    DKLGGNSSYLLRKTLASLAVIQKKPDNDFPYRKQLDECLGSALVALGPETFLSLLPLNLE 181
            +KLG NSSYLL  TL +LA IQK PD D  YRKQL EC+GSALVA+GPE FLS+LPL LE
Sbjct: 587  NKLGENSSYLLMGTLKALADIQKLPDEDLIYRKQLHECVGSALVAMGPEIFLSILPLKLE 646

Query: 182  AQDLSQVNTRLFPILKQYTIGSSLNFFTESIFDTIGLMTKKSVAHEQEGRILSARSVDRL 361
             +D ++ N  + P+LKQYT+G+ L+FF  SI + + LM +KS   + EGRI+S+RS D L
Sbjct: 647  VEDQAEANVWVLPVLKQYTVGAHLSFFRGSILNIVRLMKQKSRMLDLEGRIVSSRSCDAL 706

Query: 362  VNSLWSLLPSFCNYPVDMADSFKDLVKALYVPLREEQAIRGXXXXXXXXXXQQNKKILEG 541
            V SLWSLLPSFCNYP+D A+SFKDL K L   L EE  + G          QQNK+ILEG
Sbjct: 707  VYSLWSLLPSFCNYPLDTAESFKDLEKELCTALCEEPNVCGIICSSLQILIQQNKRILEG 766

Query: 542  NADISGT 562
              D+ G+
Sbjct: 767  KIDLHGS 773


>emb|CBI29601.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  204 bits (520), Expect = 6e-51
 Identities = 107/187 (57%), Positives = 132/187 (70%)
 Frame = +2

Query: 2   DKLGGNSSYLLRKTLASLAVIQKKPDNDFPYRKQLDECLGSALVALGPETFLSLLPLNLE 181
           +KLG NSSYLL  TL +LA IQK PD D  YRKQL EC+GSALVA+GPE FLS+LPL LE
Sbjct: 377 NKLGENSSYLLMGTLKALADIQKLPDEDLIYRKQLHECVGSALVAMGPEIFLSILPLKLE 436

Query: 182 AQDLSQVNTRLFPILKQYTIGSSLNFFTESIFDTIGLMTKKSVAHEQEGRILSARSVDRL 361
            +D ++ N  + P+LKQYT+G+ L+FF  SI + + LM +KS   + EGRI+S+RS D L
Sbjct: 437 VEDQAEANVWVLPVLKQYTVGAHLSFFRGSILNIVRLMKQKSRMLDLEGRIVSSRSCDAL 496

Query: 362 VNSLWSLLPSFCNYPVDMADSFKDLVKALYVPLREEQAIRGXXXXXXXXXXQQNKKILEG 541
           V SLWSLLPSFCNYP+D A+SFKDL K L   L EE  + G          QQNK+ILEG
Sbjct: 497 VYSLWSLLPSFCNYPLDTAESFKDLEKELCTALCEEPNVCGIICSSLQILIQQNKRILEG 556

Query: 542 NADISGT 562
             D+ G+
Sbjct: 557 KIDLHGS 563


>ref|XP_004159374.1| PREDICTED: LOW QUALITY PROTEIN: RRP12-like protein-like [Cucumis
           sativus]
          Length = 1265

 Score =  203 bits (516), Expect = 2e-50
 Identities = 103/185 (55%), Positives = 132/185 (71%)
 Frame = +2

Query: 2   DKLGGNSSYLLRKTLASLAVIQKKPDNDFPYRKQLDECLGSALVALGPETFLSLLPLNLE 181
           DKLG  SS+ L+  L SLA +QK  D DFP+RK+L ECLGSAL A+GP++FL L+P NL+
Sbjct: 404 DKLGKYSSHFLKGALISLAKMQKLRDEDFPFRKELHECLGSALGAMGPQSFLELIPFNLD 463

Query: 182 AQDLSQVNTRLFPILKQYTIGSSLNFFTESIFDTIGLMTKKSVAHEQEGRILSARSVDRL 361
            ++LSQ+N  L PILKQYT+G+ L++FT++I   IG + +KS   EQ+G I S RS+D L
Sbjct: 464 TENLSQINIWLLPILKQYTVGAHLSYFTKTILGMIGEIKQKSQKLEQQGMIFSLRSMDSL 523

Query: 362 VNSLWSLLPSFCNYPVDMADSFKDLVKALYVPLREEQAIRGXXXXXXXXXXQQNKKILEG 541
           V S WSLLPSFCNYP+D A+SFKDL KAL + L EE  +RG          QQNK++LEG
Sbjct: 524 VYSFWSLLPSFCNYPLDTAESFKDLQKALCIALNEEPDVRGIICSSLQILIQQNKRVLEG 583

Query: 542 NADIS 556
             D S
Sbjct: 584 KNDES 588


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