BLASTX nr result

ID: Bupleurum21_contig00034351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034351
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33312.3| unnamed protein product [Vitis vinifera]               85   2e-30
ref|XP_002285579.1| PREDICTED: myosin-Va-like [Vitis vinifera]         85   2e-30
ref|XP_002311708.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-30
ref|XP_004134028.1| PREDICTED: myosin-H heavy chain-like [Cucumi...    86   4e-30
emb|CBI37226.3| unnamed protein product [Vitis vinifera]               84   6e-30

>emb|CBI33312.3| unnamed protein product [Vitis vinifera]
          Length = 1669

 Score = 84.7 bits (208), Expect(2) = 2e-30
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = +2

Query: 116  LRQTVGFLVIQHKSKISCNDLTNDLCPVLSVQQLHRLCTLVYCDGDNATASVSPDVLTSM 295
            +RQ VGFLVI  KS+IS +DLTNDLCP LSVQQL+R+CTL Y D +  T SVSPDV++SM
Sbjct: 1569 IRQAVGFLVIHQKSRISYDDLTNDLCPSLSVQQLYRICTL-YWDDNYNTRSVSPDVISSM 1627

Query: 296  KEVMTTEDS 322
            +E M  EDS
Sbjct: 1628 REQM-PEDS 1635



 Score = 72.8 bits (177), Expect(2) = 2e-30
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +1

Query: 1    CCTFSNGEFVKVGLGELEIWCGQAIEEYIGPSWDELKH 114
            CCTF NGE+VK GL ELE+WCGQ  EEY+G SWDELKH
Sbjct: 1531 CCTFRNGEYVKSGLAELELWCGQTKEEYVGSSWDELKH 1568


>ref|XP_002285579.1| PREDICTED: myosin-Va-like [Vitis vinifera]
          Length = 1513

 Score = 84.7 bits (208), Expect(2) = 2e-30
 Identities = 46/69 (66%), Positives = 55/69 (79%)
 Frame = +2

Query: 116  LRQTVGFLVIQHKSKISCNDLTNDLCPVLSVQQLHRLCTLVYCDGDNATASVSPDVLTSM 295
            +RQ VGFLVI  KS+IS +DLTNDLCP LSVQQL+R+CTL Y D +  T SVSPDV++SM
Sbjct: 1388 IRQAVGFLVIHQKSRISYDDLTNDLCPSLSVQQLYRICTL-YWDDNYNTRSVSPDVISSM 1446

Query: 296  KEVMTTEDS 322
            +E M  EDS
Sbjct: 1447 REQM-PEDS 1454



 Score = 72.8 bits (177), Expect(2) = 2e-30
 Identities = 29/38 (76%), Positives = 32/38 (84%)
 Frame = +1

Query: 1    CCTFSNGEFVKVGLGELEIWCGQAIEEYIGPSWDELKH 114
            CCTF NGE+VK GL ELE+WCGQ  EEY+G SWDELKH
Sbjct: 1350 CCTFRNGEYVKSGLAELELWCGQTKEEYVGSSWDELKH 1387


>ref|XP_002311708.1| predicted protein [Populus trichocarpa] gi|222851528|gb|EEE89075.1|
            predicted protein [Populus trichocarpa]
          Length = 1509

 Score = 82.8 bits (203), Expect(2) = 3e-30
 Identities = 42/60 (70%), Positives = 50/60 (83%)
 Frame = +2

Query: 119  RQTVGFLVIQHKSKISCNDLTNDLCPVLSVQQLHRLCTLVYCDGDNATASVSPDVLTSMK 298
            RQ VGFLVI  KS+IS +++TNDLCPVLSVQQL+R+CTL Y D D  T SVSPDV++SMK
Sbjct: 1393 RQAVGFLVIHQKSRISYDEITNDLCPVLSVQQLYRVCTL-YWDDDYNTRSVSPDVISSMK 1451



 Score = 74.3 bits (181), Expect(2) = 3e-30
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = +1

Query: 1    CCTFSNGEFVKVGLGELEIWCGQAIEEYIGPSWDELKH 114
            CCTFSNGE+VK GL ELE+WCGQA EEY+G SWDELK+
Sbjct: 1354 CCTFSNGEYVKAGLAELELWCGQAKEEYVGASWDELKN 1391


>ref|XP_004134028.1| PREDICTED: myosin-H heavy chain-like [Cucumis sativus]
          Length = 1433

 Score = 86.3 bits (212), Expect(2) = 4e-30
 Identities = 45/69 (65%), Positives = 57/69 (82%)
 Frame = +2

Query: 116  LRQTVGFLVIQHKSKISCNDLTNDLCPVLSVQQLHRLCTLVYCDGDNATASVSPDVLTSM 295
            +RQ VGFLVI  KS+IS +++TNDLCP+LSVQQL+R+CTL Y D +  T SV+PDV++SM
Sbjct: 1315 VRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTL-YWDDNYNTRSVAPDVISSM 1373

Query: 296  KEVMTTEDS 322
            K VM TEDS
Sbjct: 1374 K-VMMTEDS 1381



 Score = 70.1 bits (170), Expect(2) = 4e-30
 Identities = 30/37 (81%), Positives = 31/37 (83%)
 Frame = +1

Query: 1    CCTFSNGEFVKVGLGELEIWCGQAIEEYIGPSWDELK 111
            CCTFSNGE+VK GL ELEIWC QA EEY G SWDELK
Sbjct: 1277 CCTFSNGEYVKSGLAELEIWCSQAKEEYAGSSWDELK 1313


>emb|CBI37226.3| unnamed protein product [Vitis vinifera]
          Length = 1540

 Score = 83.6 bits (205), Expect(2) = 6e-30
 Identities = 43/69 (62%), Positives = 56/69 (81%)
 Frame = +2

Query: 116  LRQTVGFLVIQHKSKISCNDLTNDLCPVLSVQQLHRLCTLVYCDGDNATASVSPDVLTSM 295
            +RQ VGFLVI  K +IS +++TNDLCP+LSVQQL+R+CTL Y D +  T SVSPDV++SM
Sbjct: 1422 IRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTL-YWDSNYNTRSVSPDVISSM 1480

Query: 296  KEVMTTEDS 322
            + V+ TEDS
Sbjct: 1481 R-VLMTEDS 1488



 Score = 72.4 bits (176), Expect(2) = 6e-30
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = +1

Query: 1    CCTFSNGEFVKVGLGELEIWCGQAIEEYIGPSWDELKH 114
            CCTFSNGE+VK GL ELE+WC QA EEY G SWDELKH
Sbjct: 1384 CCTFSNGEYVKSGLAELELWCAQAKEEYAGSSWDELKH 1421


Top