BLASTX nr result

ID: Bupleurum21_contig00034333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034333
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259...    90   8e-16
emb|CBI37626.3| unnamed protein product [Vitis vinifera]               80   8e-13
ref|XP_002329508.1| predicted protein [Populus trichocarpa] gi|2...    75   3e-11
ref|XP_002334915.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-10
ref|XP_002298719.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-07

>ref|XP_002272192.1| PREDICTED: uncharacterized protein LOC100259153 [Vitis vinifera]
          Length = 990

 Score = 89.7 bits (221), Expect = 8e-16
 Identities = 78/297 (26%), Positives = 131/297 (44%), Gaps = 6/297 (2%)
 Frame = +3

Query: 3    VIIDRDLYGHQKFSRFLSSMPHIVNIKALGEGRFSIRRAASKSYHFIEE-NPSTISDRVN 179
            V ID+D YG++KFS FL SMPHI+ +++ G+G++ ++R ASK+   +E   P ++    N
Sbjct: 288  VKIDKDFYGYRKFSHFLLSMPHILKLQSRGDGQYCVQRIASKAPEPVESIAPISVGPVSN 347

Query: 180  TSNEDVNQTIXXXXXXXXXXXAVPEEKSSVSSPRVREKDSLRNLQAPTYQLEEQSKNMPN 359
            + N +++              AV  + S   SP ++ K+    ++ P  + EE     P 
Sbjct: 348  SENRELSLNPKLHNTELSGSGAVNGKSSLPLSPELKVKEPPTKVEEPPIKEEE-----PP 402

Query: 360  PSPEKANSVKVLTGPLKKLPESREHVQVPLKKVSDNSLLVETVNGGEVANIHPCSSEEQN 539
            P  +K                                 + ET N    A  H  S  E  
Sbjct: 403  PLGQK---------------------------------VAETTN-AHAAEEH-LSPVEGP 427

Query: 540  RVPEKIGYLSR--TKWTGAKDSGPMEKQSRKLDSYATSDDSLTMVEDADSNCVKSSSASN 713
                ++G+  +   KW  +KD G  ++ +R  +   T DDS   ++ ++  C+ S S   
Sbjct: 428  ESSSEVGFFKKIWRKWFSSKDGGFEKESNRIPEKCGTCDDSSEKIK-SEEKCMDSKSQQA 486

Query: 714  DPPVGVAENLCLTDKS-VPVENVTSNYKCSDRSSKSLGFFSQIINWFKFW--SSQDD 875
            DP   V+ +    D S +  ++  S+    D+S  S  FF+++ NW KFW  S Q D
Sbjct: 487  DPIEMVSISSSNDDGSFLDKKSTRSSETYDDKSIASSNFFNKVANWCKFWRASPQSD 543


>emb|CBI37626.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 78/294 (26%), Positives = 123/294 (41%), Gaps = 3/294 (1%)
 Frame = +3

Query: 3   VIIDRDLYGHQKFSRFLSSMPHIVNIKALGEGRFSIRRAASKSYHFIEE-NPSTISDRVN 179
           V ID+D YG++KFS FL SMPHI+ +++ G+G++ ++R ASK+   +E   P ++    N
Sbjct: 288 VKIDKDFYGYRKFSHFLLSMPHILKLQSRGDGQYCVQRIASKAPEPVESIAPISVGPVSN 347

Query: 180 TSNEDVNQTIXXXXXXXXXXXAVPEEKSSVSSPRVREKDSLRNLQAPTYQLEEQSKNMPN 359
           + N +++              AV  + S   SP +++     N  A    L       P 
Sbjct: 348 SENRELSLNPKLHNTELSGSGAVNGKSSLPLSPELKKVAETTNAHAAEEHLS------PV 401

Query: 360 PSPEKANSVKVLTGPLKKLPESREHVQVPLKKVSDNSLLVETVNGGEVANIHPCSSEEQN 539
             PE ++ V       +K   S++                    GG          +E N
Sbjct: 402 EGPESSSEVGFFKKIWRKWFSSKD--------------------GG--------FEKESN 433

Query: 540 RVPEKIGYLSRTKWTGAKDSGPMEKQSRKLDSYATSDDSLTMVEDADSNCVKSSSASNDP 719
           R+PEK G       T    S  ++ + + +DS +   D + MV         S S+SND 
Sbjct: 434 RIPEKCG-------TCDDSSEKIKSEEKCMDSKSQQADPIEMV---------SISSSND- 476

Query: 720 PVGVAENLCLTDKSVPVENVTSNYKCSDRSSKSLGFFSQIINWFKFW--SSQDD 875
                +   L  KS       S+    D+S  S  FF+++ NW KFW  S Q D
Sbjct: 477 -----DGSFLDKKS-----TRSSETYDDKSIASSNFFNKVANWCKFWRASPQSD 520


>ref|XP_002329508.1| predicted protein [Populus trichocarpa] gi|222870188|gb|EEF07319.1|
            predicted protein [Populus trichocarpa]
          Length = 998

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 83/312 (26%), Positives = 132/312 (42%), Gaps = 18/312 (5%)
 Frame = +3

Query: 3    VIIDRDLYGHQKFSRFLSSMPHIVNIKALGEGRFSIRRAASKSYHFIEENPSTISDRVNT 182
            V +D+DLYG++KFSRFL SMPHI+ +K  G+G+F++R    K+    E     +     T
Sbjct: 293  VSVDKDLYGYKKFSRFLLSMPHILKLKDNGDGQFNVRGVTVKA---PEPFQPGLCKSTPT 349

Query: 183  SNEDVNQTIXXXXXXXXXXXAVPEEKSSVSSPRVREKDSLRNLQAPTYQLEEQSKNMPNP 362
            + ++ +Q I               E+ SVS P V  K SL +  +P   LE        P
Sbjct: 350  AIDNGSQPITRSSKSN-------SEEISVSGP-VDGKLSLPS--SPKLNLEAPPTKAQQP 399

Query: 363  SPEKANSVKVLTGPLKKLPESREHVQVPLKKVSDNSLL---VETVNGGEVANIHPCSSEE 533
            SP   N+VK+    L K  +  +  Q P K++     +   VE VN   + +  P   E 
Sbjct: 400  SPLNENAVKMHIQQLPKQMKQLQQAQPP-KQIEQPPAVAEKVEMVNAKVIKDHLPAVKEP 458

Query: 534  QNRVPEKIGYLS---RTKWTGAKDSGPMEKQSRKLDSYATSDDSLTMVEDADSNCVKSSS 704
             +    ++G+     R  + G  D   +E  +  ++S   S     +V+  +    +   
Sbjct: 459  VS--ASEMGFFRKFWRRLFGGKDDDSMLESDNALVESPGDS-----VVKKNEYTLEECDP 511

Query: 705  ASNDPPVGVAENLCLT-----DKSVPVENVTSNYKCSDRS-------SKSLGFFSQIINW 848
            +   P   V + +  T     D   P+   T   K + RS        KS G F +I+NW
Sbjct: 512  SGESPQEKVEKKIVKTPTQGDDLVHPIVEPTLENKTTIRSELHGEMPKKSPGLFKRILNW 571

Query: 849  FKFWSSQDDKKN 884
             K   +  D  N
Sbjct: 572  CKLQGNSSDTSN 583


>ref|XP_002334915.1| predicted protein [Populus trichocarpa] gi|222832229|gb|EEE70706.1|
           predicted protein [Populus trichocarpa]
          Length = 530

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 17/302 (5%)
 Frame = +3

Query: 3   VIIDRDLYGHQKFSRFLSSMPHIVNIKALGEGRFSIRRAASKSYHFIEENP-STISDRVN 179
           V +D+DLYG+++FSRFL SMPHI+ +K+ G+GRF +  A +K+    + NP  +    V+
Sbjct: 29  VPVDKDLYGYKEFSRFLLSMPHILRLKSDGDGRFVVHCATTKAPEPFQLNPCKSTPTAVD 88

Query: 180 TSNEDVNQTIXXXXXXXXXXXAVPEEKSSVSSPRVREKDSLRNLQAPTYQLEEQSKNMPN 359
              + + ++            +V  + S  SSP+   K     +  P+  L E+S  M  
Sbjct: 89  NGRQHITRSSKSNGEDVSASGSVDGKLSLPSSPKPNLKAPPTIMHQPS--LAEKSVKMNI 146

Query: 360 PSPEKANSVKVLTGPLKKLPESREHVQVPLKKVSDNSLLVETVNGGEVANIHPCSSEEQN 539
             P K     V   PLK++ +           V++ +   ETVN   + +  P   E  +
Sbjct: 147 QQPPKQ---MVQPQPLKQMEQP--------PAVAEKA---ETVNAKMIEDHLPAVKEHVS 192

Query: 540 RVPEKIGYLS---RTKWTGAKDSGPMEKQSRKLDSYA---TSDDSLTMVE---------- 671
               ++G+     R  + G  D   ++ ++  ++S+       +  T+ E          
Sbjct: 193 ST--EVGFFRKFWRRLFGGKVDDSELKSENVLVESFGENLVKKNENTLAEHDRSGESPQK 250

Query: 672 DADSNCVKSSSASNDPPVGVAENLCLTDKSVPVENVTSNYKCSDRSSKSLGFFSQIINWF 851
           + +   V S+S  +DP     E       +   +  TS+   ++   KS G F+QI++W 
Sbjct: 251 NFEKKSVDSTSQGDDPVDPTVET------TRENKTATSSEPHAEILRKSPGLFNQILDWC 304

Query: 852 KF 857
           KF
Sbjct: 305 KF 306


>ref|XP_002298719.1| predicted protein [Populus trichocarpa] gi|222845977|gb|EEE83524.1|
           predicted protein [Populus trichocarpa]
          Length = 855

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 6/291 (2%)
 Frame = +3

Query: 3   VIIDRDLYGHQKFSRFLSSMPHIVNIKALGEGRFSIRRAASKSYHFIEENP-STISDRVN 179
           V +D+DLYG+++FSRFL SMPHI+ +K+ G+GRF +  A +K+    + NP  +    V+
Sbjct: 294 VPVDKDLYGYKEFSRFLLSMPHILRLKSDGDGRFVVHCATTKAPEPFQLNPCKSTPTAVD 353

Query: 180 TSNEDVNQTIXXXXXXXXXXXAVPEEKSSVSSPRVREKDSLRNLQAPTYQLEEQSKNMPN 359
              + + ++                 KS+             N+Q P        K M  
Sbjct: 354 NGRQHITRS----------------SKSNGEDVSASGSSVKMNIQQP-------PKQMVQ 390

Query: 360 PSPEKANSVKVLTGPLKKLPESREHVQVPLKKVSDNSLLVETVNGGEVANIHPCSSEEQN 539
           P P K          +++ P   E                ETVN   + +  P   E  +
Sbjct: 391 PQPLK---------QMEQPPAVAEK--------------AETVNAKMIEDHLPAVKEHVS 427

Query: 540 RVPEKIGYLS---RTKWTGAKDSGPMEKQSRK-LDSYATSDDSLTMVEDADSNCVKSSSA 707
             P ++G+     R  + G  D   ++ +++K +DS +  DD +                
Sbjct: 428 --PTEVGFFRKFWRRLFGGKVDDSELKSENKKSVDSTSQGDDPV---------------- 469

Query: 708 SNDPPVGVA-ENLCLTDKSVPVENVTSNYKCSDRSSKSLGFFSQIINWFKF 857
             DP V    EN          +  TS+   ++   KS G F+QI++W KF
Sbjct: 470 --DPTVETTREN----------KTATSSEPHAEILRKSPGLFNQILDWCKF 508


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