BLASTX nr result

ID: Bupleurum21_contig00034329 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034329
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515332.1| conserved hypothetical protein [Ricinus comm...   145   3e-33
ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23

>ref|XP_002515332.1| conserved hypothetical protein [Ricinus communis]
           gi|223545812|gb|EEF47316.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 171

 Score =  145 bits (367), Expect = 3e-33
 Identities = 66/122 (54%), Positives = 90/122 (73%)
 Frame = -3

Query: 366 WIRKCTKYFDLCKIPVNQRVDVASLSMTGKAEEWMCSYMSVDKIVSWPEFVQDLTSRFRD 187
           WI+KC KYF  CKIP  Q+VD+ASL+M  KAE W+ SY+     V W +FV D+ SRF+D
Sbjct: 48  WIKKCCKYFVFCKIPDKQKVDLASLNMVDKAENWVSSYLINRTAVDWNDFVIDVNSRFKD 107

Query: 186 NSGDEVVEQFNKLCQTGDLDVYIDEFEHLKALMKQYDHILPDTYVLDSFIGGLKPAVKPF 7
            SG  VVE+FNKL QT  L+ YIDEFE +K+ M Q  ++LP+ ++++SF+GGLKP ++PF
Sbjct: 108 ESGINVVEEFNKLQQTNSLEDYIDEFEKVKSSMLQNSYVLPEKHLMESFVGGLKPGIRPF 167

Query: 6   VQ 1
           V+
Sbjct: 168 VR 169


>ref|XP_002337260.1| predicted protein [Populus trichocarpa] gi|222838644|gb|EEE77009.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/126 (43%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
 Frame = -3

Query: 375 PMNWIRKCTKYFDLCKIPVNQRVDVASLSMTGKAEEWMCSYM-SVDKIVSWPEFVQDLTS 199
           P  W+R+C K+F L   P  Q V++ASL + GKAE W   YM  +D  + W EF + + S
Sbjct: 116 PRGWLRRCNKFFKLNATPWQQWVEIASLYLEGKAEIWFEGYMCGLDVSLEWEEFSKAICS 175

Query: 198 RFRDNSGDEVVEQFNKLCQTGDLDVYIDEFEHLKALMKQYDHILPDTYVLDSFIGGLKPA 19
           RF   S D++VE+FNKL Q G ++ Y++ FE LK+LM   + +LP++Y + SFI GLK  
Sbjct: 176 RF--GSRDDIVEEFNKLTQEGGMEEYVERFEELKSLMHSLNPLLPESYYISSFISGLKED 233

Query: 18  VKPFVQ 1
           +KP ++
Sbjct: 234 IKPMLK 239


>ref|XP_002333429.1| predicted protein [Populus trichocarpa] gi|222836623|gb|EEE75016.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
 Frame = -3

Query: 375 PMNWIRKCTKYFDLCKIPVNQRVDVASLSMTGKAEEWMCSYM-SVDKIVSWPEFVQDLTS 199
           P  W+RKC KYF +  IP +Q ++V S  + GKA+ W    +   D ++ W EF QDL  
Sbjct: 28  PRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSLIEWEEFSQDLCR 87

Query: 198 RFRDNSGDEVVEQFNKLCQTGDLDVYIDEFEHLKALMKQYDHILPDTYVLDSFIGGLKPA 19
           RF   S D++VE+FNKL Q  ++D YI+ FE L++LM   + +LP+ Y + SFI GLK  
Sbjct: 88  RF--GSKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYYVSSFISGLKDE 145

Query: 18  VKPFVQ 1
           +KP ++
Sbjct: 146 IKPMLK 151


>ref|XP_002332257.1| predicted protein [Populus trichocarpa] gi|222832022|gb|EEE70499.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score =  112 bits (279), Expect = 4e-23
 Identities = 54/126 (42%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
 Frame = -3

Query: 375 PMNWIRKCTKYFDLCKIPVNQRVDVASLSMTGKAEEWMCSYM-SVDKIVSWPEFVQDLTS 199
           P  W+RKC KYF +  IP +Q ++V S  + GKA+ W    +   D ++ W EF QDL  
Sbjct: 28  PRGWMRKCKKYFRIHSIPAHQWIEVVSYYLEGKADVWFEGLVRGSDSLIEWEEFSQDLCR 87

Query: 198 RFRDNSGDEVVEQFNKLCQTGDLDVYIDEFEHLKALMKQYDHILPDTYVLDSFIGGLKPA 19
           RF   S D++VE+FNKL Q  ++D YI+ FE L++LM   + +LP+ Y + SFI GLK  
Sbjct: 88  RF--GSKDDIVEEFNKLIQDENMDDYIERFEELRSLMGDLNPLLPEAYYVSSFISGLKDE 145

Query: 18  VKPFVQ 1
           +KP ++
Sbjct: 146 IKPMLK 151


>ref|XP_002337435.1| predicted protein [Populus trichocarpa] gi|222839253|gb|EEE77604.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/126 (42%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
 Frame = -3

Query: 375 PMNWIRKCTKYFDLCKIPVNQRVDVASLSMTGKAEEWMCSYM-SVDKIVSWPEFVQDLTS 199
           P  W+R+C K+F L   P  + V++ASL + GKAE W   YM  V+ +V W +F   + +
Sbjct: 65  PRGWLRRCKKFFKLNTTPFQRWVELASLYLEGKAEIWFEGYMCGVEGVVDWEKFSGAICN 124

Query: 198 RFRDNSGDEVVEQFNKLCQTGDLDVYIDEFEHLKALMKQYDHILPDTYVLDSFIGGLKPA 19
           RF + +   +VE+FNKL Q GD+D Y++ FE LK+LM   + +LP++Y + SFI GLK  
Sbjct: 125 RFGNRTA--IVEEFNKLMQEGDVDEYVERFEELKSLMHSLNSLLPESYYISSFISGLKED 182

Query: 18  VKPFVQ 1
           +KP ++
Sbjct: 183 IKPMLK 188


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