BLASTX nr result

ID: Bupleurum21_contig00034315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034315
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266911.2| PREDICTED: scarecrow-like protein 3-like [Vi...   319   3e-85
ref|XP_002513107.1| transcription factor, putative [Ricinus comm...   317   1e-84
ref|XP_002299218.1| GRAS family transcription factor [Populus tr...   317   1e-84
ref|XP_002303907.1| GRAS family transcription factor [Populus tr...   314   1e-83
ref|XP_002336914.1| predicted protein [Populus trichocarpa] gi|2...   311   7e-83

>ref|XP_002266911.2| PREDICTED: scarecrow-like protein 3-like [Vitis vinifera]
           gi|147775853|emb|CAN60488.1| hypothetical protein
           VITISV_027673 [Vitis vinifera]
          Length = 469

 Score =  319 bits (818), Expect = 3e-85
 Identities = 160/251 (63%), Positives = 194/251 (77%), Gaps = 1/251 (0%)
 Frame = -1

Query: 756 PEGPPHLRITGIHEQKEVLDEMAHRLNEEAGNLDIPFQFNSVVCKLENLDTESL-VKTGE 580
           PEGPPHLRITGIH QKEVL++MAHRL EEA  LDIPFQFN +V KLENLD E L VKTGE
Sbjct: 177 PEGPPHLRITGIHPQKEVLEQMAHRLTEEAEKLDIPFQFNPIVSKLENLDFEKLRVKTGE 236

Query: 579 AVAVSSVLQLHHLLAFDDEMLRRNSPLGNKSFSSIQMQAALQKNTHTLGDFLGKDVMSGY 400
           A+A+SSVLQLH  LA+DDE LR+ SPL +K+ + +Q+Q  LQ N  TLG+ L  DV++ Y
Sbjct: 237 ALAISSVLQLHSFLAYDDEFLRKKSPLASKNSNGVQLQRVLQLNQTTLGELLENDVVNRY 296

Query: 399 XXXXXXXXXXXXXXXSAPKMVTFLNSLWNLSPKLMVVTEQESNHNGYSLMDRILEALNFY 220
                           +PKM  FLN+LW L+PKLMV+TEQ+SNHNG +LM+R+LE+L FY
Sbjct: 297 SLSPDSASSSPPSFTGSPKMDGFLNALWGLTPKLMVITEQDSNHNGSTLMERLLESLYFY 356

Query: 219 ASLFDCLESTASRSPIDRQKLEKMLFGEEIKNIISCEGLQRKERHEKLEKWIPRFEMAGF 40
           A+LFDCLEST  R+ I+R K+EKMLFGEEIKNII+CEG++RKERHEKLEKWI R + AGF
Sbjct: 357 AALFDCLESTLPRTSIERLKVEKMLFGEEIKNIIACEGVERKERHEKLEKWIQRLDSAGF 416

Query: 39  GRVALSYHSML 7
             + LSY+ ML
Sbjct: 417 QSMPLSYYCML 427


>ref|XP_002513107.1| transcription factor, putative [Ricinus communis]
           gi|223548118|gb|EEF49610.1| transcription factor,
           putative [Ricinus communis]
          Length = 474

 Score =  317 bits (813), Expect = 1e-84
 Identities = 165/252 (65%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
 Frame = -1

Query: 756 PEGPPHLRITGIHEQKEVLDEMAHRLNEEAGNLDIPFQFNSVVCKLENLDTESL-VKTGE 580
           PEGPPHLRITGIHEQKEVL++MA RL EEA  LDIPFQFN ++ KLE+LD ESL VKTGE
Sbjct: 180 PEGPPHLRITGIHEQKEVLEQMALRLTEEAEKLDIPFQFNPIMSKLEDLDIESLRVKTGE 239

Query: 579 AVAVSSVLQLHHLLAFDDEMLRRNSPLG-NKSFSSIQMQAALQKNTHTLGDFLGKDVMSG 403
           A+AVSSVLQLH LLA DDE+L++ SP   N   +   +   + KN  TLG++L KD++  
Sbjct: 240 ALAVSSVLQLHSLLAADDELLKQKSPATKNSKPNHFHIPLQIGKNQRTLGEWLEKDLVHV 299

Query: 402 YXXXXXXXXXXXXXXXSAPKMVTFLNSLWNLSPKLMVVTEQESNHNGYSLMDRILEALNF 223
           Y                +PKM +FLN+LW LSPKLMV+TEQESNHNG++LM+R+ EALNF
Sbjct: 300 YTASPDSALSPLSLAP-SPKMGSFLNALWGLSPKLMVITEQESNHNGFTLMERVTEALNF 358

Query: 222 YASLFDCLESTASRSPIDRQKLEKMLFGEEIKNIISCEGLQRKERHEKLEKWIPRFEMAG 43
           YA+LFDCLEST SR  I+RQK+EKML GEEIKNII+CEG++RKERHEKLEKWI R E+AG
Sbjct: 359 YAALFDCLESTVSRPSIERQKVEKMLLGEEIKNIIACEGIERKERHEKLEKWILRLELAG 418

Query: 42  FGRVALSYHSML 7
           FGRV LSYH ML
Sbjct: 419 FGRVPLSYHGML 430


>ref|XP_002299218.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222846476|gb|EEE84023.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  317 bits (813), Expect = 1e-84
 Identities = 167/252 (66%), Positives = 196/252 (77%), Gaps = 2/252 (0%)
 Frame = -1

Query: 756 PEGPPHLRITGIHEQKEVLDEMAHRLNEEAGNLDIPFQFNSVVCKLENLDTESL-VKTGE 580
           PEGPPHLRITGIHEQKEVL++MA RL EEA  LDIPFQFN +V KLENLD E+L VKTGE
Sbjct: 182 PEGPPHLRITGIHEQKEVLEQMALRLTEEAEKLDIPFQFNPIVSKLENLDLENLRVKTGE 241

Query: 579 AVAVSSVLQLHHLLAFDDEMLRRNSPLGNKSFSSIQMQAA-LQKNTHTLGDFLGKDVMSG 403
           A+AVSSVLQLH LLA DDEM RRNSP G K+ +S   Q   + +N  TLGD+L +DV++ 
Sbjct: 242 ALAVSSVLQLHTLLAMDDEMHRRNSPSGYKNPNSNHFQRVQINQNRRTLGDWLERDVVNA 301

Query: 402 YXXXXXXXXXXXXXXXSAPKMVTFLNSLWNLSPKLMVVTEQESNHNGYSLMDRILEALNF 223
           Y                +PKM +FLN+L +LSPKLMV+TEQESNHNG++LM+R+ EALNF
Sbjct: 302 YSSSPDSALSPLSLAA-SPKMGSFLNALRSLSPKLMVITEQESNHNGFNLMERVTEALNF 360

Query: 222 YASLFDCLESTASRSPIDRQKLEKMLFGEEIKNIISCEGLQRKERHEKLEKWIPRFEMAG 43
           YA+LFDCLEST SR  ++R K+EKMLFGEEIKNII+CEG  RKERHEKLEKWI R E+AG
Sbjct: 361 YAALFDCLESTVSRVSLERHKVEKMLFGEEIKNIIACEGTDRKERHEKLEKWILRLELAG 420

Query: 42  FGRVALSYHSML 7
           FG + LSYH  L
Sbjct: 421 FGIIPLSYHGRL 432


>ref|XP_002303907.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222841339|gb|EEE78886.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 476

 Score =  314 bits (805), Expect = 1e-83
 Identities = 165/253 (65%), Positives = 198/253 (78%), Gaps = 3/253 (1%)
 Frame = -1

Query: 756 PEGPPHLRITGIHEQKEVLDEMAHRLNEEAGNLDIPFQFNSVVCKLENLDTESL-VKTGE 580
           PEGPPHLRITGIHE+KEVL +MA RL EEA  LDIPFQFN +V KLENLD  +L VKTGE
Sbjct: 181 PEGPPHLRITGIHEKKEVLGQMALRLTEEAEKLDIPFQFNPIVSKLENLDLGNLRVKTGE 240

Query: 579 AVAVSSVLQLHHLLAFDDEMLRRNSPLGNKSFSSIQMQAALQ--KNTHTLGDFLGKDVMS 406
           A+AVSSVLQLH LLA DDEM +RNSP G+K+ SS   Q  L+  +N HTLG++L KD+++
Sbjct: 241 ALAVSSVLQLHALLAMDDEMHKRNSPSGSKNPSSNHFQRVLRMNQNRHTLGEWLEKDLVN 300

Query: 405 GYXXXXXXXXXXXXXXXSAPKMVTFLNSLWNLSPKLMVVTEQESNHNGYSLMDRILEALN 226
            Y                +PKM +FLN+L +LSPKLMV+TEQESNHN Y+LM+R+ +ALN
Sbjct: 301 VYSSSPDSALSPLSLSA-SPKMSSFLNALRSLSPKLMVITEQESNHNEYTLMERVTKALN 359

Query: 225 FYASLFDCLESTASRSPIDRQKLEKMLFGEEIKNIISCEGLQRKERHEKLEKWIPRFEMA 46
           FYA+LFDCLEST SR+ ++R K+EKMLFGEEIKNII+CEG +RKERHEKLEKWI R E+A
Sbjct: 360 FYAALFDCLESTVSRASLERHKVEKMLFGEEIKNIIACEGTERKERHEKLEKWILRLELA 419

Query: 45  GFGRVALSYHSML 7
           GFG + LSYH  L
Sbjct: 420 GFGSIPLSYHGRL 432


>ref|XP_002336914.1| predicted protein [Populus trichocarpa] gi|222837119|gb|EEE75498.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  311 bits (798), Expect = 7e-83
 Identities = 163/253 (64%), Positives = 198/253 (78%), Gaps = 3/253 (1%)
 Frame = -1

Query: 756 PEGPPHLRITGIHEQKEVLDEMAHRLNEEAGNLDIPFQFNSVVCKLENLDTESL-VKTGE 580
           PEGPPHLRITGIHE+KEVL +MA RL EEA  LDIPFQFN +V KLENLD  +L VKTGE
Sbjct: 59  PEGPPHLRITGIHEKKEVLGQMALRLTEEAEKLDIPFQFNPIVSKLENLDLGNLRVKTGE 118

Query: 579 AVAVSSVLQLHHLLAFDDEMLRRNSPLGNKSFSSIQMQAALQ--KNTHTLGDFLGKDVMS 406
           A+AVSSVLQLH LLA DDEM +RNSP G+K+ SS   Q  L+  +N HTLG++L KD+++
Sbjct: 119 ALAVSSVLQLHALLAMDDEMHKRNSPSGSKNPSSNHFQRVLRMNQNRHTLGEWLEKDLVN 178

Query: 405 GYXXXXXXXXXXXXXXXSAPKMVTFLNSLWNLSPKLMVVTEQESNHNGYSLMDRILEALN 226
            Y                +PKM +FLN+L +LSPKL+V+TEQESNHN ++LM+R+ +ALN
Sbjct: 179 VYSSSPDSALSPLSLSA-SPKMSSFLNALRSLSPKLLVITEQESNHNEFTLMERVTKALN 237

Query: 225 FYASLFDCLESTASRSPIDRQKLEKMLFGEEIKNIISCEGLQRKERHEKLEKWIPRFEMA 46
           FYA+LFDCLEST SR+ ++R K+EKMLFGEEIKNII+CEG +RKERHEKLEKWI R E+A
Sbjct: 238 FYAALFDCLESTVSRASLERHKVEKMLFGEEIKNIIACEGTERKERHEKLEKWILRLELA 297

Query: 45  GFGRVALSYHSML 7
           GFG + LSYH  L
Sbjct: 298 GFGSIPLSYHGRL 310


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