BLASTX nr result

ID: Bupleurum21_contig00034312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034312
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_002529628.1| pentatricopeptide repeat-containing protein,...   170   1e-40
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   167   8e-40
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   157   7e-37
ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ...   154   6e-36

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Vitis vinifera]
          Length = 573

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/105 (76%), Positives = 92/105 (87%)
 Frame = -2

Query: 316 GCLIDLLGRAGLFDEAYKVIEEMRIPPDEVVWGSLLNGCKIHGRMEMAEVAVKKLIGIDP 137
           GCL+DLLGRAG F+EA +V+  MRI PDEV+WGSLLNGCKIHG  ++AE ++KKLI +DP
Sbjct: 438 GCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDP 497

Query: 136 NNGGYGIMLANIYSESGRWDEVRKMRKVLKELNVHKTPGCSWIEI 2
           NNGGYGIMLANIY E G+WDEVRK+RKVLKE N HKTPGCSWIEI
Sbjct: 498 NNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEI 542


>ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530913|gb|EEF32773.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  170 bits (430), Expect = 1e-40
 Identities = 74/105 (70%), Positives = 91/105 (86%)
 Frame = -2

Query: 316 GCLIDLLGRAGLFDEAYKVIEEMRIPPDEVVWGSLLNGCKIHGRMEMAEVAVKKLIGIDP 137
           GCL+D+LGRAG F+EA +V+ EM+I PDEVVWGSLLNGCK+HG  ++AE A+KKLI IDP
Sbjct: 264 GCLVDILGRAGRFEEALEVVREMKIEPDEVVWGSLLNGCKVHGNTDLAESAIKKLIEIDP 323

Query: 136 NNGGYGIMLANIYSESGRWDEVRKMRKVLKELNVHKTPGCSWIEI 2
            NGGYGIMLAN+Y   G+WDEVRK+RK+LK+ N +KTPGCSWIE+
Sbjct: 324 KNGGYGIMLANLYGGLGKWDEVRKVRKMLKDHNAYKTPGCSWIEV 368


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
           gi|449510706|ref|XP_004163739.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  167 bits (423), Expect = 8e-40
 Identities = 76/105 (72%), Positives = 90/105 (85%)
 Frame = -2

Query: 316 GCLIDLLGRAGLFDEAYKVIEEMRIPPDEVVWGSLLNGCKIHGRMEMAEVAVKKLIGIDP 137
           GCLIDLLGRAG F+EA +V+  M I PDEVVWGSLLN CKIHGR ++AE +VKKLI +DP
Sbjct: 428 GCLIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDP 487

Query: 136 NNGGYGIMLANIYSESGRWDEVRKMRKVLKELNVHKTPGCSWIEI 2
            NGGY IMLANIY+E G+WDEVRK+R++LKE N +KTPGCSWIE+
Sbjct: 488 KNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEV 532


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  157 bits (398), Expect = 7e-37
 Identities = 71/105 (67%), Positives = 85/105 (80%)
 Frame = -2

Query: 316 GCLIDLLGRAGLFDEAYKVIEEMRIPPDEVVWGSLLNGCKIHGRMEMAEVAVKKLIGIDP 137
           GCLIDLLGRAG FDEA  V++ M + PDEVVWGSLLNGCK+HGR ++AE A KKLI IDP
Sbjct: 380 GCLIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEIDP 439

Query: 136 NNGGYGIMLANIYSESGRWDEVRKMRKVLKELNVHKTPGCSWIEI 2
           +NGGY IMLAN+Y E G+WDEVR + + LK+   +K PGCSWIE+
Sbjct: 440 HNGGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEV 484


>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
           gi|355494601|gb|AES75804.1| hypothetical protein
           MTR_6g059820 [Medicago truncatula]
          Length = 528

 Score =  154 bits (390), Expect = 6e-36
 Identities = 69/105 (65%), Positives = 84/105 (80%)
 Frame = -2

Query: 316 GCLIDLLGRAGLFDEAYKVIEEMRIPPDEVVWGSLLNGCKIHGRMEMAEVAVKKLIGIDP 137
           GCLIDLLGRAG FDEA  V++ M + PDEVVWGSLLNGCK+HGR ++AE A KKL+ IDP
Sbjct: 386 GCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDP 445

Query: 136 NNGGYGIMLANIYSESGRWDEVRKMRKVLKELNVHKTPGCSWIEI 2
           +NGGYG MLANIY + G+WDE+R +   LK+   +K PGCSWIE+
Sbjct: 446 HNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEV 490


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