BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034307
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   116   3e-24
ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   116   4e-24
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...    96   5e-18
ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glyci...    92   9e-17
ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arab...    90   3e-16

>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  116 bits (291), Expect = 3e-24
 Identities = 65/130 (50%), Positives = 84/130 (64%)
 Frame = -3

Query: 645 NLKSVERYHQYMYAVSYSDHSCFAEIQEFIELLQPSTIKGIVSSSPAYVDPHYYFGHLCR 466
           +++SVER HQY+Y+V YSDHSCF+EIQEFIEL+QP+++KGIVSSS  Y++P YYFG LCR
Sbjct: 303 SVQSVERLHQYIYSVPYSDHSCFSEIQEFIELVQPTSMKGIVSSSSCYINPVYYFGRLCR 362

Query: 465 GYQPSWKNQKLDSHVEKKSEEEFGTKYNFGSKDFVEAATKQRRHRRSPLGSNVGWVSKLR 286
               +W  Q++    EKK   +  TK   G    + AA K+R  R       V  V  LR
Sbjct: 363 ---ENWSAQRMRDKYEKKEVVDVQTKSYCGKYIPMGAAKKRRTGR-------VSRVRALR 412

Query: 285 RVRCGTKILE 256
           R+R G KI E
Sbjct: 413 RIRHGAKIEE 422


>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  116 bits (290), Expect = 4e-24
 Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
 Frame = -3

Query: 642 LKSVERYHQYMYAVSYSDHSCFAEIQEFIELLQPSTIKGIVSSSPAYVDPHYYFGHLCRG 463
           L+SV R+HQY+Y+V YS+HSCF EI++FI+L+QP  IKGIVSSS  Y++P YYFG LC G
Sbjct: 305 LRSVVRFHQYIYSVPYSEHSCFPEIEDFIKLVQPINIKGIVSSSFCYIEPLYYFGGLC-G 363

Query: 462 YQPSWKNQKLDSHVEKKSEE-EFGTKYNFGSKDFVEAATKQRRHRRSPLGSNVGWVSKLR 286
             PS +     S   +K E  E  TK N GS +F +A  + R+ +   LGS++  VS LR
Sbjct: 364 VNPSSQRLPRKSERREKYENIEAKTKSNSGSSNFTDA--ENRKRKIDFLGSHLRRVSILR 421

Query: 285 RVRCGTKILEIDS 247
           R + G KI+E DS
Sbjct: 422 RAQRGVKIVENDS 434


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 56/134 (41%), Positives = 77/134 (57%)
 Frame = -3

Query: 651 TRNLKSVERYHQYMYAVSYSDHSCFAEIQEFIELLQPSTIKGIVSSSPAYVDPHYYFGHL 472
           T  ++SV + H+Y+++V YSDH+CF+EIQEFI+L+ P+TIKGIVSSS  Y++P YYFG L
Sbjct: 301 TGKVESVTKLHKYIFSVPYSDHACFSEIQEFIKLICPTTIKGIVSSSSCYIEPLYYFGRL 360

Query: 471 CRGYQPSWKNQKLDSHVEKKSEEEFGTKYNFGSKDFVEAATKQRRHRRSPLGSNVGWVSK 292
           C   QP  K        E K E++   K+    K                 G  +G VS 
Sbjct: 361 CGAKQPVNKFHHKKERTE-KVEKDVDIKFVNWKKGTNAGILN--------AGVRLGRVSA 411

Query: 291 LRRVRCGTKILEID 250
           LRRV+ G ++ E D
Sbjct: 412 LRRVQRGARLQEDD 425


>ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
          Length = 437

 Score = 92.0 bits (227), Expect = 9e-17
 Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 3/134 (2%)
 Frame = -3

Query: 636 SVERYHQYMYAVSYSDHSCFAEIQEFIELLQPSTIKGIVSSSPAYVDPHYYFGHLCRGYQ 457
           S E+ H+Y+Y V YSDHS + EI++F++L++P+T+KGIVSSS  Y++P YYFG LC G Q
Sbjct: 301 SPEKIHKYIYTVPYSDHSNYEEIEDFVKLVKPTTLKGIVSSSSCYIEPMYYFGRLCPGNQ 360

Query: 456 PS---WKNQKLDSHVEKKSEEEFGTKYNFGSKDFVEAATKQRRHRRSPLGSNVGWVSKLR 286
            +    +  K   + +++ EE   +K  F   +F     + +  +    G +V  +S LR
Sbjct: 361 QTDQVHEGCKGKENGKREREEAVRSKTLFEGDNFETGRDRGKALKGRFSGVHVSRLSILR 420

Query: 285 RVRCGTKILEIDSN 244
           + R G KI E D +
Sbjct: 421 KKRRGAKIQEHDDS 434


>ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
           lyrata] gi|297336568|gb|EFH66985.1| hypothetical protein
           ARALYDRAFT_472944 [Arabidopsis lyrata subsp. lyrata]
          Length = 422

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/130 (40%), Positives = 76/130 (58%), Gaps = 1/130 (0%)
 Frame = -3

Query: 636 SVERYHQYMYAVSYSDHSCFAEIQEFIELLQPSTIKGIVSSSPAYVDPHYYFGHLCRGYQ 457
           +V ++H YMY+V YSDHSC+ EI EFI+L++P ++KGIV SS +YVDP YYFG +C   Q
Sbjct: 297 AVHKFHDYMYSVHYSDHSCYEEIGEFIKLVKPKSMKGIVVSSSSYVDPLYYFGRICGANQ 356

Query: 456 PSWKNQKLDSHVEKKSEEEFGTKYNFGSKDFVEAATKQRRHRRSPLGSNVGWVSKLR-RV 280
           P    Q L    +   E +     ++ + D      K++R +R    S      + R +V
Sbjct: 357 PP---QVLLMRPDIADEFQAVRIKSYSATDKTRVLEKEKRWKRDSHSSLKRNKKRARIQV 413

Query: 279 RCGTKILEID 250
           +C  KILE+D
Sbjct: 414 KC-AKILEVD 422