BLASTX nr result

ID: Bupleurum21_contig00034283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034283
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK88676.1| WRKY32 [Catharanthus roseus]                            45   4e-09
gb|AFN84538.1| WRKY4 [Cucurbita pepo]                                  46   6e-09
ref|XP_003519145.1| PREDICTED: probable WRKY transcription facto...    46   8e-08
emb|CAN81922.1| hypothetical protein VITISV_010335 [Vitis vinifera]    41   1e-07
gb|ADD70008.1| WRKY transcription factor [Vitis pseudoreticulata]      41   1e-07

>gb|AFK88676.1| WRKY32 [Catharanthus roseus]
          Length = 517

 Score = 45.4 bits (106), Expect(2) = 4e-09
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = +1

Query: 145 QGRELTGEPMHIGGEKSIDSAKTLLITGTEIKPC 246
           +G ELT +P   GGEK+++SA+TLL  G EIKPC
Sbjct: 480 EGGELTSKPSETGGEKAMESARTLLSIGFEIKPC 513



 Score = 40.0 bits (92), Expect(2) = 4e-09
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = +2

Query: 2   HDMPVPKKRHG---XXXXXXXXXXXXXXGTKEINEPEAYEKHISAAQWSVDKAES*LVSR 172
           HDMPVPKK HG                  T ++ + E  +  +SAA+WS DK    L S+
Sbjct: 428 HDMPVPKKHHGPPSVPLIAASASSPASVNTSQVTKSETCQDQVSAARWSADKEGGELTSK 487


>gb|AFN84538.1| WRKY4 [Cucurbita pepo]
          Length = 472

 Score = 45.8 bits (107), Expect(2) = 6e-09
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +1

Query: 154 ELTGEPMHIGGEKSIDSAKTLLITGTEIKPC 246
           ELTGE + +GGEK+++SA+TLL  G EIKPC
Sbjct: 442 ELTGEALDLGGEKAMESARTLLSIGFEIKPC 472



 Score = 39.3 bits (90), Expect(2) = 6e-09
 Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   HDMPVPKKRHG-XXXXXXXXXXXXXXGTKEINEPEAYEKHISAAQWSVD 145
           HDMPVPKKRHG               G  +  + +A +  IS+ QWSVD
Sbjct: 390 HDMPVPKKRHGPPSAPLVAAAAPASMGNMQPKKTDAVQSQISSTQWSVD 438


>ref|XP_003519145.1| PREDICTED: probable WRKY transcription factor 32-like [Glycine max]
          Length = 505

 Score = 46.2 bits (108), Expect(2) = 8e-08
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = +1

Query: 154 ELTGEPMHIGGEKSIDSAKTLLITGTEIKPC 246
           ELTGE + +GGEK+++SA+TLL  G EIKPC
Sbjct: 475 ELTGEALELGGEKAMESARTLLSIGFEIKPC 505



 Score = 35.0 bits (79), Expect(2) = 8e-08
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   HDMPVPKKRHG-XXXXXXXXXXXXXXGTKEINEPEAYEKHISAAQWSVD 145
           HDMPVPKKRHG                + ++ +P++ +    + QWSVD
Sbjct: 423 HDMPVPKKRHGPPSAPLVAAAAPASMNSLQVKKPDSPQNKKISTQWSVD 471


>emb|CAN81922.1| hypothetical protein VITISV_010335 [Vitis vinifera]
          Length = 1798

 Score = 40.8 bits (94), Expect(2) = 1e-07
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2    HDMPVPKKRHG-XXXXXXXXXXXXXXGTKEINEPEAYEKHISAAQWSVD 145
            HDMPVPKKRHG                + +  + EA++  IS+ QWSVD
Sbjct: 1716 HDMPVPKKRHGPPSAPLVAAAAPASMNSLQFKKTEAFQNQISSTQWSVD 1764



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = +1

Query: 154  ELTGEPMHIGGEKSIDSAKTLLITGTEIKPC 246
            EL  E +  GGEK+++SA+TLL  G EIKPC
Sbjct: 1768 ELAAEELDPGGEKAMESARTLLSIGFEIKPC 1798


>gb|ADD70008.1| WRKY transcription factor [Vitis pseudoreticulata]
          Length = 499

 Score = 40.8 bits (94), Expect(2) = 1e-07
 Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +2

Query: 2   HDMPVPKKRHG-XXXXXXXXXXXXXXGTKEINEPEAYEKHISAAQWSVD 145
           HDMPVPKKRHG                + +  + EA++  IS+ QWSVD
Sbjct: 417 HDMPVPKKRHGPPSAPLVAVAAPASMNSLQFKKTEAFQNQISSTQWSVD 465



 Score = 39.7 bits (91), Expect(2) = 1e-07
 Identities = 18/31 (58%), Positives = 23/31 (74%)
 Frame = +1

Query: 154 ELTGEPMHIGGEKSIDSAKTLLITGTEIKPC 246
           EL  E +  GGEK+++SA+TLL  G EIKPC
Sbjct: 469 ELAAEELDPGGEKAMESARTLLSIGFEIKPC 499


Top