BLASTX nr result

ID: Bupleurum21_contig00034259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034259
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29961.3| unnamed protein product [Vitis vinifera]              206   2e-51
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   206   2e-51
ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...   205   3e-51
ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation...   203   1e-50
ref|XP_002531589.1| Eukaryotic translation initiation factor 3 s...   203   1e-50

>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/113 (85%), Positives = 107/113 (94%)
 Frame = -2

Query: 341 AQKLEILFSVISAQFDVNPSLSGHMPINVWKKCVQNMLLVLDILAQYPDILVDDSVEPDE 162
           AQKLEILFSV+SAQFDVNPSLSGHMPINVWKKCVQNML++LDIL Q+ +ILVDD VEP+E
Sbjct: 262 AQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLVILDILVQHSNILVDDVVEPEE 321

Query: 161 NETQKGPDFKGTIRIWGNLAAFLEKIDVEFFKSLQIIDPHTREYVERLRDEPV 3
           NETQKG D+KGTIR+WGNL AFLE+IDVEFFKSLQ IDPHTREYVERLRDEP+
Sbjct: 322 NETQKGADYKGTIRVWGNLVAFLERIDVEFFKSLQCIDPHTREYVERLRDEPL 374


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Vitis vinifera]
          Length = 946

 Score =  206 bits (523), Expect = 2e-51
 Identities = 97/113 (85%), Positives = 107/113 (94%)
 Frame = -2

Query: 341 AQKLEILFSVISAQFDVNPSLSGHMPINVWKKCVQNMLLVLDILAQYPDILVDDSVEPDE 162
           AQKLEILFSV+SAQFDVNPSLSGHMPINVWKKCVQNML++LDIL Q+ +ILVDD VEP+E
Sbjct: 293 AQKLEILFSVVSAQFDVNPSLSGHMPINVWKKCVQNMLVILDILVQHSNILVDDVVEPEE 352

Query: 161 NETQKGPDFKGTIRIWGNLAAFLEKIDVEFFKSLQIIDPHTREYVERLRDEPV 3
           NETQKG D+KGTIR+WGNL AFLE+IDVEFFKSLQ IDPHTREYVERLRDEP+
Sbjct: 353 NETQKGADYKGTIRVWGNLVAFLERIDVEFFKSLQCIDPHTREYVERLRDEPL 405


>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 926

 Score =  205 bits (521), Expect = 3e-51
 Identities = 95/112 (84%), Positives = 105/112 (93%)
 Frame = -2

Query: 341 AQKLEILFSVISAQFDVNPSLSGHMPINVWKKCVQNMLLVLDILAQYPDILVDDSVEPDE 162
           AQKLEILFSV+SAQFDVNP L+GHMPINVWKKCVQNML++LDIL QYP+I+VDDSVEPDE
Sbjct: 288 AQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLIILDILVQYPNIMVDDSVEPDE 347

Query: 161 NETQKGPDFKGTIRIWGNLAAFLEKIDVEFFKSLQIIDPHTREYVERLRDEP 6
           NETQKG +  GTIR+WGNL AFLE+IDVEFFKSLQ IDPHTR+YVERLRDEP
Sbjct: 348 NETQKGAEHNGTIRVWGNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEP 399


>ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           C-like [Glycine max]
          Length = 926

 Score =  203 bits (516), Expect = 1e-50
 Identities = 94/113 (83%), Positives = 106/113 (93%)
 Frame = -2

Query: 341 AQKLEILFSVISAQFDVNPSLSGHMPINVWKKCVQNMLLVLDILAQYPDILVDDSVEPDE 162
           AQKLEILFSV+SAQFDVNP L+GHMPINVWKKCVQNML++LDIL Q+P+I+VDDSVEPDE
Sbjct: 285 AQKLEILFSVVSAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQHPNIVVDDSVEPDE 344

Query: 161 NETQKGPDFKGTIRIWGNLAAFLEKIDVEFFKSLQIIDPHTREYVERLRDEPV 3
           NETQKG D+ G IR+WGNL AFLE+IDVEFFKSLQ IDPHTR+YVERLRDEP+
Sbjct: 345 NETQKGVDYNGPIRVWGNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEPL 397


>ref|XP_002531589.1| Eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223528785|gb|EEF30792.1|
           Eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 619

 Score =  203 bits (516), Expect = 1e-50
 Identities = 94/113 (83%), Positives = 105/113 (92%)
 Frame = -2

Query: 341 AQKLEILFSVISAQFDVNPSLSGHMPINVWKKCVQNMLLVLDILAQYPDILVDDSVEPDE 162
           AQKLEILFSV+SAQFDVNP LSGHMPINVWKKCVQNML++LDIL QYP+I+VDD VEPDE
Sbjct: 287 AQKLEILFSVVSAQFDVNPGLSGHMPINVWKKCVQNMLVILDILVQYPNIVVDDMVEPDE 346

Query: 161 NETQKGPDFKGTIRIWGNLAAFLEKIDVEFFKSLQIIDPHTREYVERLRDEPV 3
           NE+QKG D+ GTIR+WGNL AFLE+ID EFFKSLQ IDPHTREYVERL+DEP+
Sbjct: 347 NESQKGVDYNGTIRVWGNLVAFLERIDTEFFKSLQCIDPHTREYVERLQDEPM 399


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