BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034247
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   195   4e-48
gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]                 190   1e-46
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        189   2e-46
gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   189   3e-46
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   189   3e-46

>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  195 bits (496), Expect = 4e-48
 Identities = 93/178 (52%), Positives = 125/178 (70%)
 Frame = -2

Query: 538 WYLDNGASNHMTGARNKFIELDDSISGQVRFGDGSVVEIKGKGTVQMLYKNGEEKQLNEV 359
           WYLDNGASNHMTG ++ F EL++SI G+V+FGDGS V+I GKG++    K GE+K L  +
Sbjct: 201 WYLDNGASNHMTGDKSFFSELNESIKGRVKFGDGSCVKINGKGSIIFEAKTGEQKLLTNI 260

Query: 358 YYIPCLRSNIISLGQLSETGNRVELKGEFLRVFDDKERLMMKVKRSPNRLYKIIIDTNKH 179
           YYIP LRSNI+SLGQ +E G  V +K  +L + D   RL++KV RSPNRLYK+ +   K 
Sbjct: 261 YYIPELRSNILSLGQATEQGCDVRMKDNYLTLRDPSGRLLVKVLRSPNRLYKVSLKVGKP 320

Query: 178 ECMMTKAEEMSKLWHARLGHVNYQAMSLMSKFQMVEGMPRTLNLT*VCDGCLMGKQTR 5
            C++TK  E    WHARLGH+N++ +  M+K +MV G+P       +C+ CL+GKQTR
Sbjct: 321 SCLLTKINEEPWRWHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQTR 378


>gb|ABW74585.1| pol polyprotein [Boechera divaricarpa]
          Length = 551

 Score =  190 bits (483), Expect = 1e-46
 Identities = 93/183 (50%), Positives = 129/183 (70%)
 Frame = -2

Query: 550 ESNVWYLDNGASNHMTGARNKFIELDDSISGQVRFGDGSVVEIKGKGTVQMLYKNGEEKQ 371
           E   WYLDNGASNHMTG R+ F EL+++I G+V+FGDGS V+I GKG++    K GE++ 
Sbjct: 328 EEGTWYLDNGASNHMTGVRSYFAELNENIKGKVKFGDGSCVDIGGKGSILFQGKTGEQQL 387

Query: 370 LNEVYYIPCLRSNIISLGQLSETGNRVELKGEFLRVFDDKERLMMKVKRSPNRLYKIIID 191
           + ++YYIP L+SNI+SLGQ +E G  V ++ ++L + D   RL++KV RSPNRLYKI + 
Sbjct: 388 VIDIYYIPDLKSNILSLGQATEFGCDVRIRHDYLTLHDPHGRLLVKVIRSPNRLYKINLK 447

Query: 190 TNKHECMMTKAEEMSKLWHARLGHVNYQAMSLMSKFQMVEGMPRTLNLT*VCDGCLMGKQ 11
             K  C+ TK E  +  WHARLGH+N++ +  MSK +MV G+P       VC+ CL+GKQ
Sbjct: 448 IGKPICLHTKIEGDTWRWHARLGHINFKTIKDMSKQEMVYGLPEIEEEKQVCEPCLVGKQ 507

Query: 10  TRK 2
           TR+
Sbjct: 508 TRQ 510


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  189 bits (481), Expect = 2e-46
 Identities = 91/188 (48%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
 Frame = -2

Query: 562 EGTRESNVWYLDNGASNHMTGARNKFIELDDSISGQVRFGDGSVVEIKGKGTVQMLYKNG 383
           +G    ++WYLDNGASNHM+G R KF ELD++++GQVRFGD S V+I G+G++    KNG
Sbjct: 166 KGAAAGDLWYLDNGASNHMSGDRRKFRELDETVTGQVRFGDASSVQIMGQGSILFSCKNG 225

Query: 382 EEKQLNEVYYIPCLRSNIISLGQLSETGNRVELKGEFLRVFDDKE-RLMMKVKRSPNRLY 206
           ++  L++VYYIP L  N++SLGQL+ETG+RV + G+ L VFD    RL+MKV+R+ NRLY
Sbjct: 226 DQWLLDDVYYIPSLCCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRTSNRLY 285

Query: 205 KIIIDTNKHECMMTKAEEMSKLWHARLGHVNYQAMSLMSKFQMVEGMPRTLNLT*VCDGC 26
           +I +      C++   ++ + LWHARLGHVN+ A+ L+   +MV G+P   +   +C  C
Sbjct: 286 RIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMVAGVPAVHHPNQLCQAC 345

Query: 25  LMGKQTRK 2
           L+ KQ R+
Sbjct: 346 LVAKQVRQ 353


>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
           gi|108710383|gb|ABF98178.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  189 bits (480), Expect = 3e-46
 Identities = 91/188 (48%), Positives = 130/188 (69%), Gaps = 1/188 (0%)
 Frame = -2

Query: 562 EGTRESNVWYLDNGASNHMTGARNKFIELDDSISGQVRFGDGSVVEIKGKGTVQMLYKNG 383
           +G    ++WYLDNGASNHM+G   KF ELD++++GQVRFGD S V+I GKG++    KNG
Sbjct: 306 KGAAAGDLWYLDNGASNHMSGDHRKFRELDETVTGQVRFGDASSVQIMGKGSILFSCKNG 365

Query: 382 EEKQLNEVYYIPCLRSNIISLGQLSETGNRVELKGEFLRVFDDKE-RLMMKVKRSPNRLY 206
           ++  L++VYYIP L  N++SLGQL+ETG+RV + G+ L VFD    RL+MKV+RS NRLY
Sbjct: 366 DQWLLDDVYYIPSLYCNMVSLGQLTETGHRVVMDGDDLEVFDKNPWRLVMKVRRSSNRLY 425

Query: 205 KIIIDTNKHECMMTKAEEMSKLWHARLGHVNYQAMSLMSKFQMVEGMPRTLNLT*VCDGC 26
           +I +      C++   ++ + LWHARLGHVN+ A+ L+   +M  G+P   +   +C  C
Sbjct: 426 RIELQLASPVCLLASLDDPAWLWHARLGHVNFHALKLLVDKEMAAGVPAVHHPNQLCQAC 485

Query: 25  LMGKQTRK 2
           L+ KQ R+
Sbjct: 486 LVAKQVRQ 493


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
           gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
           Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  189 bits (479), Expect = 3e-46
 Identities = 92/187 (49%), Positives = 131/187 (70%), Gaps = 1/187 (0%)
 Frame = -2

Query: 559 GTRESNVWYLDNGASNHMTGARNKFIELDDSISGQVRFGDGSVVEIKGKGTVQMLYKNGE 380
           G    ++W+LDNGASNHMTG R KF +LD SI+G V+FGD S V+I+GKG++    KNG+
Sbjct: 354 GAATGDIWFLDNGASNHMTGDRAKFRDLDVSITGSVKFGDASTVKIQGKGSILFSCKNGD 413

Query: 379 EKQLNEVYYIPCLRSNIISLGQLSETGNRVELKGEFLRVFDDKE-RLMMKVKRSPNRLYK 203
           +  L +V+YIP L  N++SLGQL+ETG+RV +  + L VFD    RL+M+V+R+PNRLY+
Sbjct: 414 QWLLQDVFYIPSLCCNMVSLGQLTETGHRVVMDEDVLEVFDKSPLRLVMRVRRTPNRLYR 473

Query: 202 IIIDTNKHECMMTKAEEMSKLWHARLGHVNYQAMSLMSKFQMVEGMPRTLNLT*VCDGCL 23
           I +      C++T+ +E + LWHARLGHVN+QAM L++   M  G+P   +   +C  CL
Sbjct: 474 IELKLATPVCLLTRMDEPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACL 533

Query: 22  MGKQTRK 2
           + KQ R+
Sbjct: 534 VAKQIRQ 540