BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034228
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulga...   218   5e-55
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ...   202   4e-50
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   201   8e-50
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   201   8e-50
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   200   1e-49

>emb|CBL54154.1| hypothetical protein (mitochondrion) [Beta vulgaris subsp.
           maritima]
          Length = 266

 Score =  218 bits (555), Expect = 5e-55
 Identities = 97/185 (52%), Positives = 133/185 (71%)
 Frame = -1

Query: 556 KECTREKYRYFLTIVDDYSRHTWLYLLESKSESLATLEKFLNYTKNQFNKSIKILRSDNA 377
           K  TR   RYF+TIVDDYSR  W+ LL+ KS++   ++ FL   K Q+ K +K++RSDNA
Sbjct: 57  KVMTRTHCRYFMTIVDDYSRVIWVQLLKQKSDAYEAIKGFLKMVKTQYGKQVKVIRSDNA 116

Query: 376 LEFTSHACNSFFDKHGIIHQTSCVHRPQQNARVERKHRHILEIARSLRFQAALPLKFWGD 197
            EF  + C + +   G++HQTSCV RPQQN R ERKHR+ILE++R+LRFQA L LK+WGD
Sbjct: 117 FEFEDNQCKALYADQGVVHQTSCVDRPQQNGRAERKHRNILEMSRALRFQAGLALKYWGD 176

Query: 196 CAMTAVYIINRLPSSVLNNKTPYELLYHEIPDYSTMKIFGCLSFAYNSSTVPDKLAPRGI 17
           C   AV+I NRLP+ +LN  +PYE+++++ P+ S ++ FGCL+ AYN S   DK   RG+
Sbjct: 177 CVQAAVHITNRLPTPLLNGLSPYEVMHNKKPNSSVLRTFGCLAMAYNPSRYKDKFEERGV 236

Query: 16  PCVFL 2
           PCV+L
Sbjct: 237 PCVYL 241


>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
          Length = 492

 Score =  202 bits (513), Expect = 4e-50
 Identities = 101/178 (56%), Positives = 123/178 (69%), Gaps = 1/178 (0%)
 Frame = -1

Query: 532 RYFLTIVDDYSRHTWLYLLESKSESLATLEKFLNYTKNQFNKSIKILRSDNALEFTSHAC 353
           RYFLTIVDD+SR TW YLL +KS + ATL+  L+  + QF+  +KI+RSDNA E  S   
Sbjct: 90  RYFLTIVDDFSRATWTYLLTTKSNAFATLKSLLSLIERQFSSKVKIIRSDNAYELGSGVI 149

Query: 352 NS-FFDKHGIIHQTSCVHRPQQNARVERKHRHILEIARSLRFQAALPLKFWGDCAMTAVY 176
            S F    GIIHQT+CV  PQQN  VERKHRH+LE  R+L +Q+ LP KFWGDC +TA Y
Sbjct: 150 PSEFLASLGIIHQTTCVGTPQQNGVVERKHRHLLETCRALLYQSHLPKKFWGDCLLTATY 209

Query: 175 IINRLPSSVLNNKTPYELLYHEIPDYSTMKIFGCLSFAYNSSTVPDKLAPRGIPCVFL 2
           +INR PS VLN K PY++L+  +PDYS +K FG L F    +   DKL PR IP VFL
Sbjct: 210 LINRFPSKVLNGKCPYQVLFGSLPDYSHLKSFGSLCFVSTLTRHRDKLMPRAIPGVFL 267


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  201 bits (510), Expect = 8e-50
 Identities = 96/176 (54%), Positives = 124/176 (70%)
 Frame = -1

Query: 529  YFLTIVDDYSRHTWLYLLESKSESLATLEKFLNYTKNQFNKSIKILRSDNALEFTSHACN 350
            YFLTIVDD+SR  W YLL +KSE  + L  FL YT+ QF KS+KI+RSDN  EF     +
Sbjct: 588  YFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFM--CLS 645

Query: 349  SFFDKHGIIHQTSCVHRPQQNARVERKHRHILEIARSLRFQAALPLKFWGDCAMTAVYII 170
            S+F + GI+HQTSCV  PQQN RVERKHRHIL ++R+L FQA+LP+KFWG+  MTA Y+I
Sbjct: 646  SYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLI 705

Query: 169  NRLPSSVLNNKTPYELLYHEIPDYSTMKIFGCLSFAYNSSTVPDKLAPRGIPCVFL 2
            NR PSS+ N  +PYELL+   PDY  +++FG   +A+  +   DK   R   C+F+
Sbjct: 706  NRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFV 761


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  201 bits (510), Expect = 8e-50
 Identities = 96/176 (54%), Positives = 124/176 (70%)
 Frame = -1

Query: 529  YFLTIVDDYSRHTWLYLLESKSESLATLEKFLNYTKNQFNKSIKILRSDNALEFTSHACN 350
            YFLTIVDD+SR  W YLL +KSE  + L  FL YT+ QF KS+KI+RSDN  EF     +
Sbjct: 588  YFLTIVDDFSRSVWTYLLLAKSEVRSVLTNFLAYTEKQFGKSVKIIRSDNGTEFM--CLS 645

Query: 349  SFFDKHGIIHQTSCVHRPQQNARVERKHRHILEIARSLRFQAALPLKFWGDCAMTAVYII 170
            S+F + GI+HQTSCV  PQQN RVERKHRHIL ++R+L FQA+LP+KFWG+  MTA Y+I
Sbjct: 646  SYFKEQGIVHQTSCVGTPQQNGRVERKHRHILNVSRALLFQASLPIKFWGEAVMTAAYLI 705

Query: 169  NRLPSSVLNNKTPYELLYHEIPDYSTMKIFGCLSFAYNSSTVPDKLAPRGIPCVFL 2
            NR PSS+ N  +PYELL+   PDY  +++FG   +A+  +   DK   R   C+F+
Sbjct: 706  NRTPSSIHNGLSPYELLHGCKPDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFV 761


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/177 (53%), Positives = 123/177 (69%)
 Frame = -1

Query: 532 RYFLTIVDDYSRHTWLYLLESKSESLATLEKFLNYTKNQFNKSIKILRSDNALEFTSHAC 353
           RYFLTI+DDYSR  WLYLL  KSE+   L+ F   T  QFN  IK +RSDN  EF     
Sbjct: 467 RYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQFNVKIKTVRSDNGTEFL--CL 524

Query: 352 NSFFDKHGIIHQTSCVHRPQQNARVERKHRHILEIARSLRFQAALPLKFWGDCAMTAVYI 173
             FF + G+IH+ SCV  P++N RVERKHRH+L +AR+LRFQA LP++FWG+C +TA Y+
Sbjct: 525 TKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYL 584

Query: 172 INRLPSSVLNNKTPYELLYHEIPDYSTMKIFGCLSFAYNSSTVPDKLAPRGIPCVFL 2
           INR PSSVLN+ TPYE L+ + P +  +++FG L +A+N +   DK A R   CVF+
Sbjct: 585 INRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFV 641