BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034227
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...   118   5e-56
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ...   118   6e-29
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ...   112   6e-23
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]    76   9e-23
emb|CBI40707.3| unnamed protein product [Vitis vinifera]              109   5e-22

>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
            gi|355477385|gb|AES58588.1| Ribosomal protein S10
            [Medicago truncatula]
          Length = 1152

 Score =  118 bits (295), Expect(3) = 5e-56
 Identities = 71/108 (65%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
 Frame = +3

Query: 345  KNGGTTL--GRRQSKKRRLTQLKEGALEAYLIILCYXXXXXXXXXXXXLASKPARPRGSK 518
            K  GTTL  GRR+SKKRRLT LK                         LASKPARPRG K
Sbjct: 1008 KREGTTLTLGRRRSKKRRLTLLK-------------------------LASKPARPRGIK 1042

Query: 519  RSLPVLTWISGDGIRRPEATSSRGRGLALADRLAVSLATAKRLPSAKE 662
            RSLPVLTWISGDG RRPE TSSRGR LAL DRLAVSLATAKRLPSAK+
Sbjct: 1043 RSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090



 Score =  100 bits (249), Expect(3) = 5e-56
 Identities = 48/52 (92%), Positives = 49/52 (94%), Gaps = 1/52 (1%)
 Frame = +1

Query: 196  FSFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQK 348
            F FRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK
Sbjct: 957  FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQK 1008



 Score = 47.0 bits (110), Expect(3) = 5e-56
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +2

Query: 38   GYEAWERMQEVYDTTGNLKEWRQT 109
            GY AWER++EV DTTGNLKEWRQ+
Sbjct: 933  GYAAWERIKEVSDTTGNLKEWRQS 956


>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477460|gb|AES58663.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 159

 Score =  118 bits (295), Expect(2) = 6e-29
 Identities = 71/108 (65%), Positives = 73/108 (67%), Gaps = 2/108 (1%)
 Frame = +3

Query: 345 KNGGTTL--GRRQSKKRRLTQLKEGALEAYLIILCYXXXXXXXXXXXXLASKPARPRGSK 518
           K  GTTL  GRR+SKKRRLT LK                         LASKPARPRG K
Sbjct: 15  KREGTTLTLGRRRSKKRRLTLLK-------------------------LASKPARPRGIK 49

Query: 519 RSLPVLTWISGDGIRRPEATSSRGRGLALADRLAVSLATAKRLPSAKE 662
           RSLPVLTWISGDG RRPE TSSRGR LAL DRLAVSLATAKRLPSAK+
Sbjct: 50  RSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97



 Score = 35.8 bits (81), Expect(2) = 6e-29
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1

Query: 304 MGSTCEQGKPNGNQK 348
           MGSTC+QGKPNGNQK
Sbjct: 1   MGSTCKQGKPNGNQK 15


>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
           gi|355477358|gb|AES58561.1| hypothetical protein
           MTR_1g005810 [Medicago truncatula]
          Length = 146

 Score =  112 bits (281), Expect = 6e-23
 Identities = 53/58 (91%), Positives = 54/58 (93%)
 Frame = -3

Query: 296 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKEKPTHPSAPLVDRCGFTKRLSTVHSR 123
           +KGDLVLYSG  FPTEARK PSCPRSHSVNRK KPTHPSAPLVDRCGFTKRLSTVHSR
Sbjct: 89  KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGFTKRLSTVHSR 146



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 44/61 (72%), Positives = 45/61 (73%)
 Frame = -1

Query: 661 SFALGKRFXXXXXXXXXXXXXKPRPRLLVASGRLIPSPEIQVSTGKDLLLPRGRAGLEAS 482
           SFALGKRF             K RPRLLV SGRL PSPEIQVSTGKDLL+PRGRAGLEAS
Sbjct: 19  SFALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEAS 78

Query: 481 Y 479
           Y
Sbjct: 79  Y 79


>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
          Length = 267

 Score = 69.3 bits (168), Expect(2) = 9e-23
 Identities = 36/50 (72%), Positives = 37/50 (74%)
 Frame = -2

Query: 237 PIVSQITFRESKGEAYXXXXXXXXXXRFYEASKHSSLALINQEVCRHSLR 88
           P  +QITFRESKGEAY          RFYEASKHSSLALINQE CRHSLR
Sbjct: 140 PSCTQITFRESKGEAYSSISSSRRSVRFYEASKHSSLALINQEFCRHSLR 189



 Score = 63.9 bits (154), Expect(2) = 9e-23
 Identities = 33/49 (67%), Positives = 35/49 (71%), Gaps = 11/49 (22%)
 Frame = -3

Query: 341 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSC 228
           +P+GL  S            VDPMAARKGDLVLYSGDLFPTEARKLPSC
Sbjct: 94  YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSC 142



 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 592 RPRLLVASGRLIPSPEIQVSTGKDLLLPRGRAGLEASY 479
           RPRLLVASGRLIPSPEIQVSTGKDLL+PRGRAGLEASY
Sbjct: 42  RPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASY 79


>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
          Length = 574

 Score =  109 bits (273), Expect = 5e-22
 Identities = 52/58 (89%), Positives = 52/58 (89%)
 Frame = +1

Query: 190 VGFSFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGVPH 363
           VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTG  H
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYH 572