BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034223
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46820.1| coat protein [Raphanus sativus cryptic virus 1]        317   1e-84
gb|ABX79673.1| putative coat protein [Raphanus sativus cryptic v...   317   2e-84
ref|YP_656505.1| coat protein [Raphanus sativus cryptic virus 1]...   233   3e-59
emb|CAQ53730.1| coat protein [Chondrostereum purpureum cryptic v...    83   7e-14
gb|ACO37246.1| putative coat protein [Heterobasidion RNA Virus 3]      64   4e-08

>gb|ABA46820.1| coat protein [Raphanus sativus cryptic virus 1]
          Length = 502

 Score =  317 bits (813), Expect = 1e-84
 Identities = 156/255 (61%), Positives = 192/255 (75%)
 Frame = -2

Query: 769 PCSQIYICMLVFIQTMRAMDAAGFLMPGSEISVLYSDFCDKFPIQNLWIPGPLVSGFKSI 590
           P SQIYI +L +IQTMRAM+AAG L P SEIS L  +F   FP+++LWIPGPLVS FKSI
Sbjct: 134 PYSQIYIGILGYIQTMRAMNAAGLLEPNSEISRLLGNFMKVFPLKSLWIPGPLVSFFKSI 193

Query: 589 ACFRPSASGKFGNVTPVLSTSPGWSRERNYRPHDNVTSHLPNLHFFISRLISVCAAATRP 410
           ACF+PSAS K G V+P L T PGWSR R YR   + +SHLPN++ FISRL S+CAAA+R 
Sbjct: 194 ACFKPSASEKHGMVSPTLPTRPGWSRNRRYRIVTDASSHLPNINIFISRLRSICAAASRN 253

Query: 409 NTNESLFLSDVDGPRYVANIFGHACDHQVNEQAILSSPGASLAYSGNLKLWLDANSQLPF 230
              E  FL D+DGP+Y+A +F   C H  +E A LSSPG++L+YSG+L+LW  A+++L F
Sbjct: 254 GATEDSFLRDIDGPQYLATLFAQPCSHTASEIANLSSPGSNLSYSGDLRLWKLASARLSF 313

Query: 229 IGLPPALNLNEDEVSDSWTSFLGLSDDSSWFGSIAAMMAKYCQFWKGSVPLYECSASSSA 50
           +G    L+    +VSD+WT+FLG S+ S WFGSI AMM KYCQFWKGS  LYECS +SSA
Sbjct: 314 VGPLALLDSAVTDVSDNWTAFLGFSERSDWFGSINAMMVKYCQFWKGSTTLYECSPASSA 373

Query: 49  AGAVRCIATSTNIFT 5
           AG+VRCIAT TNIFT
Sbjct: 374 AGSVRCIATDTNIFT 388


>gb|ABX79673.1| putative coat protein [Raphanus sativus cryptic virus 1]
          Length = 502

 Score =  317 bits (812), Expect = 2e-84
 Identities = 156/255 (61%), Positives = 191/255 (74%)
 Frame = -2

Query: 769 PCSQIYICMLVFIQTMRAMDAAGFLMPGSEISVLYSDFCDKFPIQNLWIPGPLVSGFKSI 590
           P SQIYI +L +IQTMRAM+AAG L P SEIS L  +F   FP+++LWIPGPLVS FKSI
Sbjct: 134 PYSQIYIGILGYIQTMRAMNAAGLLEPNSEISRLLGNFMKVFPLKSLWIPGPLVSFFKSI 193

Query: 589 ACFRPSASGKFGNVTPVLSTSPGWSRERNYRPHDNVTSHLPNLHFFISRLISVCAAATRP 410
           ACF+PSAS K G V+P L T PGWSR R YR   + +SHLPN++ FISRL S+CAAA+R 
Sbjct: 194 ACFKPSASEKHGMVSPTLPTRPGWSRNRRYRIVTDASSHLPNINIFISRLRSICAAASRN 253

Query: 409 NTNESLFLSDVDGPRYVANIFGHACDHQVNEQAILSSPGASLAYSGNLKLWLDANSQLPF 230
              E  FL D+DGP+Y+A +F   C H  NE A L SPG++L+YSG+L+LW  A+++L F
Sbjct: 254 GATEDSFLRDIDGPQYLATLFAQPCSHTANEIANLISPGSNLSYSGDLRLWKLASARLSF 313

Query: 229 IGLPPALNLNEDEVSDSWTSFLGLSDDSSWFGSIAAMMAKYCQFWKGSVPLYECSASSSA 50
           +G    L+    +VSD+WT+FLG S+ S WFGSI AMM KYCQFWKGS  LYECS +SSA
Sbjct: 314 VGPLALLDSAVTDVSDNWTAFLGFSERSDWFGSINAMMVKYCQFWKGSTTLYECSPASSA 373

Query: 49  AGAVRCIATSTNIFT 5
           AG+VRCIAT TNIFT
Sbjct: 374 AGSVRCIATDTNIFT 388


>ref|YP_656505.1| coat protein [Raphanus sativus cryptic virus 1]
           gi|76573429|gb|ABA46819.1| coat protein [Raphanus
           sativus cryptic virus 1]
          Length = 505

 Score =  233 bits (594), Expect = 3e-59
 Identities = 114/246 (46%), Positives = 156/246 (63%)
 Frame = -2

Query: 769 PCSQIYICMLVFIQTMRAMDAAGFLMPGSEISVLYSDFCDKFPIQNLWIPGPLVSGFKSI 590
           P SQIYI ML+++Q MRAM  AG L P SE+S L+++    FP ++L +PGPLV+ F++I
Sbjct: 138 PYSQIYISMLLYLQVMRAMKKAGVLRPNSELSHLFNEMSTIFPFESLMVPGPLVNLFENI 197

Query: 589 ACFRPSASGKFGNVTPVLSTSPGWSRERNYRPHDNVTSHLPNLHFFISRLISVCAAATRP 410
             FRP  +  FGNVTP L   PGWS    + P+ ++  HLP++   ISRL  +C  A+  
Sbjct: 198 TAFRPLQTDSFGNVTPFLPAEPGWSNATFFAPNGSLVRHLPHIPALISRLRRICETASEN 257

Query: 409 NTNESLFLSDVDGPRYVANIFGHACDHQVNEQAILSSPGASLAYSGNLKLWLDANSQLPF 230
             N+  F +   GP +++ +FGH CD+ + EQ +L +PG + +YSG L LW  A SQL  
Sbjct: 258 GLNDISFSAHHHGPEFISELFGHICDNDLPEQLLLLTPGLATSYSGTLYLWRQARSQLQR 317

Query: 229 IGLPPALNLNEDEVSDSWTSFLGLSDDSSWFGSIAAMMAKYCQFWKGSVPLYECSASSSA 50
              P AL +N D V ++WTSFL L +D SWF  +AAMM KYCQ+W GS PL    A  SA
Sbjct: 318 SLFPEALTVN-DVVPNTWTSFLCLDNDDSWFSPLAAMMNKYCQYWHGSAPLSSIPADGSA 376

Query: 49  AGAVRC 32
           AG++ C
Sbjct: 377 AGSMIC 382


>emb|CAQ53730.1| coat protein [Chondrostereum purpureum cryptic virus 1]
          Length = 480

 Score = 82.8 bits (203), Expect = 7e-14
 Identities = 73/257 (28%), Positives = 110/257 (42%), Gaps = 10/257 (3%)
 Frame = -2

Query: 763 SQIYICMLVFIQTMRAMDAAGFLMPGSEISVLYSDFCDKFPIQNLWIPGPLVSGFKSIAC 584
           S++YI +L +IQT+R M A GFL P   I+ + ++    FP + L +PGPLVS F+S+  
Sbjct: 139 SRVYIAVLFWIQTIRCMQATGFL-PREGIAFI-NELLQDFPARTLVVPGPLVSLFRSLCA 196

Query: 583 FRPSASGKFGNVTPVLST-----SPGWSRERNYRPHDNVTSHLPNLHFFISRLISVC-AA 422
             PS  G +G+V P   T     SP      N          +PN+   + +L     A 
Sbjct: 197 SSPSF-GTYGDVFPAFETAGIGASPANCFTLNSARFPQWYMLMPNVALLLDQLTCFTQAC 255

Query: 421 ATRPNTNESLFLSDVDGPRYVANIFGHACDHQVN---EQAILSSPGASLAYSGNLKLWLD 251
              P T     + D        ++FG   D  +    +Q +  +PG +     N K   +
Sbjct: 256 VNNPATIGDFVIGD--------DLFGTPFDGTIGSHRQQRV--APGMTEPVYFNTKAAEN 305

Query: 250 ANSQLPFIGLPPALNLNEDEVSD-SWTSFLGLSDDSSWFGSIAAMMAKYCQFWKGSVPLY 74
             S    + LP  LN +    +  +       + D  WF  I + M  Y +F+ GSV LY
Sbjct: 306 HASMRNLMALPTRLNYDPQNATPLTLNEMFRFNTDKRWFSRIISTMTVYSKFFDGSVTLY 365

Query: 73  ECSASSSAAGAVRCIAT 23
           EC      A  V  + T
Sbjct: 366 ECPPVGPPAAQVSMVRT 382


>gb|ACO37246.1| putative coat protein [Heterobasidion RNA Virus 3]
          Length = 521

 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 66/264 (25%), Positives = 103/264 (39%), Gaps = 24/264 (9%)
 Frame = -2

Query: 763 SQIYICMLVFIQTMRAMDAAGFLMPGSEISVLYSDFCDKFPIQNLW---IPGPLVSGFKS 593
           SQ Y+ +L+FIQ  RA   AG L    E++ +Y  FC   P  NL    +PGP ++    
Sbjct: 142 SQYYLSVLIFIQVARAKHEAGLL--SGELADVYDLFCGHSPAINLNALPVPGPFLNMLSQ 199

Query: 592 IACFRPSASGKFGNVTPVLSTSPGWSRERNYR---PHDNVTSHLPNLHFFISRLISVCAA 422
           +A   P       N+ P++  +   +    Y       N+   LPN+ + + +L  +   
Sbjct: 200 VAAHIPHLVD-MDNICPIVPNNLEATNTSYYLYTGQCQNLRGRLPNVPYILDQLHQLGVL 258

Query: 421 ATR-------PNTNESLFLSDVDGPRYVANIF-GHACDHQ----------VNEQAILSSP 296
            T         N    L  S +  P + A +  G+A               +   I   P
Sbjct: 259 LTANPVGIDVANQGRVLHHSFLGVPMFDATVAPGNAAQWNSRVAFDAGFTASGSFIAVDP 318

Query: 295 GASLAYSGNLKLWLDANSQLPFIGLPPALNLNEDEVSDSWTSFLGLSDDSSWFGSIAAMM 116
            A   +  N  L          I +      N   V+ SWT FLGL D+  +F  +  +M
Sbjct: 319 AARHPFFLNRGLLSQITDYAALINVTRPARQNAAAVTPSWTQFLGL-DNMPFFLQVVRIM 377

Query: 115 AKYCQFWKGSVPLYECSASSSAAG 44
           + Y +FW+GS  L   + S    G
Sbjct: 378 SWYSKFWQGSSDLMSFTPSGHTGG 401