BLASTX nr result

ID: Bupleurum21_contig00034199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034199
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312663.1| predicted protein [Populus trichocarpa] gi|2...    64   6e-14
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]    57   3e-12
gb|AAV31385.1| putative polyprotein [Oryza sativa Japonica Group]      52   6e-12
emb|CAE04628.3| OSJNBa0028I23.10 [Oryza sativa Japonica Group]         49   8e-12
emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]                 49   8e-12

>ref|XP_002312663.1| predicted protein [Populus trichocarpa] gi|222852483|gb|EEE90030.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score = 64.3 bits (155), Expect(2) = 6e-14
 Identities = 30/56 (53%), Positives = 39/56 (69%)
 Frame = +2

Query: 299 R*LLVDLLLIEIRDFDVILGMDWLERHKATIDCLKR*IMFEDSESLEFEFQGSTLS 466
           R LL DL+++EI  FDVILGMDWL RH A++DC  + ++F+  E  EF F G  LS
Sbjct: 506 RNLLGDLVILEIVGFDVILGMDWLSRHHASVDCWNKTVIFKPDEETEFAFHGDGLS 561



 Score = 37.7 bits (86), Expect(2) = 6e-14
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +3

Query: 126 AIILFDTGATHSFVSTLHARHLGILLAKLECEFSIGTPTGITMSVNT*YIDCVI 287
           A +LFDTGATHSFVS+  A         LE    +  P+   M     Y+DC +
Sbjct: 448 ARVLFDTGATHSFVSSYFALRFTKQPILLESPLCVAIPSDEVMFGEYVYVDCEV 501


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score = 57.4 bits (137), Expect(2) = 3e-12
 Identities = 25/52 (48%), Positives = 38/52 (73%)
 Frame = +2

Query: 299 R*LLVDLLLIEIRDFDVILGMDWLERHKATIDCLKR*IMFEDSESLEFEFQG 454
           R +LVDL+L++++DFDVILGMDWL  + A+IDC ++ + F      +F F+G
Sbjct: 153 REMLVDLVLLDLQDFDVILGMDWLTSYHASIDCFEKRVTFSIPGQPKFSFEG 204



 Score = 38.9 bits (89), Expect(2) = 3e-12
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = +3

Query: 126 AIILFDTGATHSFVSTLHARHLGILLAKLECEFSIGTPTGITMSVNT*YIDCVIDFG 296
           A +L D G+THSFVS   A  LG+ +A ++ +  + TP G  +  +    +C++  G
Sbjct: 95  ARVLIDPGSTHSFVSVSFAGLLGLPVASMDFDLIVATPVGDFVVASRMLRNCIVMIG 151


>gb|AAV31385.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1493

 Score = 52.0 bits (123), Expect(2) = 6e-12
 Identities = 23/46 (50%), Positives = 31/46 (67%)
 Frame = +2

Query: 314 DLLLIEIRDFDVILGMDWLERHKATIDCLKR*IMFEDSESLEFEFQ 451
           +L+L+E +D DVILGMDWL RH+  IDC  R I   +++  E  FQ
Sbjct: 475 NLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEEVTFQ 520



 Score = 43.1 bits (100), Expect(2) = 6e-12
 Identities = 22/59 (37%), Positives = 31/59 (52%)
 Frame = +3

Query: 69  DVAATPGTLLTILSTGKRNAIILFDTGATHSFVSTLHARHLGILLAKLECEFSIGTPTG 245
           +  + P  +L         A+ILFD+GATHSF+S   A   G+ L KL+    + TP G
Sbjct: 394 EAQSAPEVILGTFPVNSTLAVILFDSGATHSFISKRFAGAHGLSLVKLKIPMRVHTPGG 452


>emb|CAE04628.3| OSJNBa0028I23.10 [Oryza sativa Japonica Group]
          Length = 1462

 Score = 49.3 bits (116), Expect(2) = 8e-12
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = +2

Query: 314 DLLLIEIRDFDVILGMDWLERHKATIDCLKR*IMFEDSESLEFEFQ 451
           +L+L+E +D DVILGMDWL RH+  IDC  R I   +++     FQ
Sbjct: 474 NLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEVVTFQ 519



 Score = 45.4 bits (106), Expect(2) = 8e-12
 Identities = 25/71 (35%), Positives = 35/71 (49%)
 Frame = +3

Query: 33  FVYTCNLLCNL*DVAATPGTLLTILSTGKRNAIILFDTGATHSFVSTLHARHLGILLAKL 212
           FV  C    +  +  + P  +L         A+ILFD+GATHSF+S   A   G+ L KL
Sbjct: 381 FVQACVNHASAEEAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKL 440

Query: 213 ECEFSIGTPTG 245
           +    + TP G
Sbjct: 441 KIPMRVHTPGG 451


>emb|CAH66529.1| H0502B11.9 [Oryza sativa Indica Group]
          Length = 1450

 Score = 49.3 bits (116), Expect(2) = 8e-12
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = +2

Query: 314 DLLLIEIRDFDVILGMDWLERHKATIDCLKR*IMFEDSESLEFEFQ 451
           +L+L+E +D DVILGMDWL RH+  IDC  R I   +++     FQ
Sbjct: 400 NLILLESKDLDVILGMDWLTRHRGVIDCASRTIKLTNAKGEVVTFQ 445



 Score = 45.4 bits (106), Expect(2) = 8e-12
 Identities = 25/71 (35%), Positives = 35/71 (49%)
 Frame = +3

Query: 33  FVYTCNLLCNL*DVAATPGTLLTILSTGKRNAIILFDTGATHSFVSTLHARHLGILLAKL 212
           FV  C    +  +  + P  +L         A+ILFD+GATHSF+S   A   G+ L KL
Sbjct: 307 FVQACVNHASAEEAQSAPEVILGTFPVNSTPAVILFDSGATHSFISKRFAGAHGLSLVKL 366

Query: 213 ECEFSIGTPTG 245
           +    + TP G
Sbjct: 367 KIPMRVHTPGG 377


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