BLASTX nr result

ID: Bupleurum21_contig00034186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034186
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235725.1| uncharacterized protein LOC100500278 [Glycin...    61   1e-07
ref|XP_003529626.1| PREDICTED: uncharacterized protein LOC100813...    58   7e-07
emb|CAN68638.1| hypothetical protein VITISV_030805 [Vitis vinifera]    56   3e-06
ref|XP_002305590.1| predicted protein [Populus trichocarpa] gi|1...    55   6e-06

>ref|NP_001235725.1| uncharacterized protein LOC100500278 [Glycine max]
           gi|255629910|gb|ACU15306.1| unknown [Glycine max]
          Length = 111

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 17/86 (19%)
 Frame = -2

Query: 386 AVNTPLEIGTRGTVGSLITQEIKYFKQLEMKCQNKTQPSIRSII---------------- 255
           A  TP+ IGTRGT+GSL+ +EI+YF + E+    + QP   +++                
Sbjct: 2   AAPTPVAIGTRGTIGSLVRKEIEYFSKFELGSSQRPQPHFVNMVSRRGYSTSRPSFWVLL 61

Query: 254 -TSPTKKKKGNSRLIPSMCSMVDVVE 180
            T   +K++GN+  +P MCS+ +VVE
Sbjct: 62  MTGKRRKRRGNNVFLPKMCSVAEVVE 87


>ref|XP_003529626.1| PREDICTED: uncharacterized protein LOC100813148 [Glycine max]
          Length = 111

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 17/86 (19%)
 Frame = -2

Query: 386 AVNTPLEIGTRGTVGSLITQEIKYFKQLEMKCQNKTQPSIRSII---------------- 255
           A  TP+ IGTRGT+GSL+ +EI+YF   E+    + QP   +I+                
Sbjct: 2   AAPTPVAIGTRGTIGSLVKKEIEYFSMFELGNSQRPQPHFVNIVSGRGYSTSRSSFWVLL 61

Query: 254 -TSPTKKKKGNSRLIPSMCSMVDVVE 180
            T   +K++ N+  +P MCS+ +VVE
Sbjct: 62  MTGKRRKRRDNNVFLPKMCSVAEVVE 87


>emb|CAN68638.1| hypothetical protein VITISV_030805 [Vitis vinifera]
          Length = 194

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 21/98 (21%)
 Frame = -2

Query: 410 SSNAAERKAVNTPLEIGTRGTVGSLITQEIKYFKQLEMK-----CQNKTQPSIRSIITSP 246
           ++   ER A   P+E+GTRGTVGSL+ +EI+YF +LE+         ++Q  +  + +  
Sbjct: 9   ATKCPERMAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVVDVASGS 68

Query: 245 T----------------KKKKGNSRLIPSMCSMVDVVE 180
           T                KK++ +   +PS+CS+V+V +
Sbjct: 69  TGRSRHRFWFLIMTWRRKKRRSSRTFLPSICSVVEVAD 106


>ref|XP_002305590.1| predicted protein [Populus trichocarpa] gi|118482524|gb|ABK93184.1|
           unknown [Populus trichocarpa]
           gi|222848554|gb|EEE86101.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 18/87 (20%)
 Frame = -2

Query: 386 AVNTPLEIGTRGTVGSLITQEIKYFKQLEM-KC----------------QNKTQPSIRSI 258
           A   P+ IGTRGTVGSL+ +EI+YF + E+ +C                  +++PS  S+
Sbjct: 2   AATAPVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQVADIASSNGQSRPSFWSL 61

Query: 257 ITS-PTKKKKGNSRLIPSMCSMVDVVE 180
             S   KK++G+S  +PS+CS V+V +
Sbjct: 62  TMSWKRKKRRGSSGFLPSICSAVEVAD 88


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