BLASTX nr result

ID: Bupleurum21_contig00034184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034184
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315633.1| multidrug resistance protein ABC transporter...   146   1e-33
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   146   2e-33
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   145   3e-33
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   145   4e-33
emb|CBI27547.3| unnamed protein product [Vitis vinifera]              141   6e-32

>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1044

 Score =  146 bits (369), Expect = 1e-33
 Identities = 73/102 (71%), Positives = 81/102 (79%)
 Frame = -3

Query: 306 ARELARMVGIRKAPILHHFSESISGASTIRCFNQEDRFLNRNISLINDYSRVAFHNSSTM 127
           ARELARMVGIRKAPILHHFSESI+GA+TIRCFNQE+RFL RN+SLI+DYSR+ FHNS TM
Sbjct: 644 ARELARMVGIRKAPILHHFSESIAGAATIRCFNQEERFLTRNLSLIDDYSRIVFHNSGTM 703

Query: 126 EWLCVRXXXXXXXXXXXXXXXXXXLPRSAIDPSLAGLAATYG 1
           EWLCVR                  LP+SAI+PSLAGLAATYG
Sbjct: 704 EWLCVRINFLFNLGFFLVLIILVSLPKSAINPSLAGLAATYG 745


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/102 (70%), Positives = 82/102 (80%)
 Frame = -3

Query: 306  ARELARMVGIRKAPILHHFSESISGASTIRCFNQEDRFLNRNISLINDYSRVAFHNSSTM 127
            ARELARMVG+RKAPILHHFSES++GA+TIRCF+Q+DRFL RN+SLI+DYSRVAFHN++TM
Sbjct: 1059 ARELARMVGVRKAPILHHFSESVAGAATIRCFSQDDRFLRRNLSLIDDYSRVAFHNTATM 1118

Query: 126  EWLCVRXXXXXXXXXXXXXXXXXXLPRSAIDPSLAGLAATYG 1
            EWLCVR                  LPRSAI PSLAGLAATYG
Sbjct: 1119 EWLCVRINFLFNLVFFLVLVILVSLPRSAISPSLAGLAATYG 1160


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  145 bits (366), Expect = 3e-33
 Identities = 72/102 (70%), Positives = 81/102 (79%)
 Frame = -3

Query: 306  ARELARMVGIRKAPILHHFSESISGASTIRCFNQEDRFLNRNISLINDYSRVAFHNSSTM 127
            ARELARMVGIRKAPILHHFSESI+GA+TIRCFNQE+RFL R++SLI+DYSR+ FHNS TM
Sbjct: 964  ARELARMVGIRKAPILHHFSESITGAATIRCFNQEERFLMRSLSLIDDYSRIVFHNSGTM 1023

Query: 126  EWLCVRXXXXXXXXXXXXXXXXXXLPRSAIDPSLAGLAATYG 1
            EWLC+R                  LP+SAIDPSLAGLAATYG
Sbjct: 1024 EWLCIRINFLFNLGFFLVLIILVNLPKSAIDPSLAGLAATYG 1065


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  145 bits (365), Expect = 4e-33
 Identities = 72/102 (70%), Positives = 80/102 (78%)
 Frame = -3

Query: 306  ARELARMVGIRKAPILHHFSESISGASTIRCFNQEDRFLNRNISLINDYSRVAFHNSSTM 127
            ARELARMVGIRKAPILHHFSESI+GA+TI CFNQ+DRFL RN+SLI+DYSR+ FHN+ TM
Sbjct: 1060 ARELARMVGIRKAPILHHFSESIAGAATIHCFNQQDRFLMRNLSLIDDYSRIVFHNTGTM 1119

Query: 126  EWLCVRXXXXXXXXXXXXXXXXXXLPRSAIDPSLAGLAATYG 1
            EWLC+R                  LPRSAIDPSLAGLAATYG
Sbjct: 1120 EWLCLRINFLFNLVFFLVLIILVNLPRSAIDPSLAGLAATYG 1161


>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/100 (69%), Positives = 80/100 (80%)
 Frame = -3

Query: 300  ELARMVGIRKAPILHHFSESISGASTIRCFNQEDRFLNRNISLINDYSRVAFHNSSTMEW 121
            +LARMVG+RKAPILHHFSES++GA+TIRCF+Q+DRFL RN+SLI+DYSRVAFHN++TMEW
Sbjct: 962  KLARMVGVRKAPILHHFSESVAGAATIRCFSQDDRFLRRNLSLIDDYSRVAFHNTATMEW 1021

Query: 120  LCVRXXXXXXXXXXXXXXXXXXLPRSAIDPSLAGLAATYG 1
            LCVR                  LPRSAI PSLAGLAATYG
Sbjct: 1022 LCVRINFLFNLVFFLVLVILVSLPRSAISPSLAGLAATYG 1061


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