BLASTX nr result

ID: Bupleurum21_contig00034179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034179
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267029.2| PREDICTED: reticuline oxidase-like protein-l...    60   1e-11
ref|XP_002523167.1| Reticuline oxidase precursor, putative [Rici...    58   7e-11
ref|XP_002330615.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-10
ref|XP_002523149.1| Reticuline oxidase precursor, putative [Rici...    49   5e-08
ref|XP_003638113.1| Reticuline oxidase [Medicago truncatula] gi|...    49   6e-08

>ref|XP_002267029.2| PREDICTED: reticuline oxidase-like protein-like [Vitis vinifera]
          Length = 780

 Score = 59.7 bits (143), Expect(3) = 1e-11
 Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 LLIAKPLGKDLYCTVRRWGEAIFGF-VS*NIKLVRVSSVGAFFIIHK*LRQGAPKLVH** 300
           +L  + +G+ L+  +R  G A FG  VS  IKLVRV      F IHK L QGA KLVH  
Sbjct: 454 ILNRESMGESLFWAIRGGGGASFGILVSWKIKLVRVPPTVTVFTIHKTLEQGATKLVHRW 513

Query: 301 QYAAEKLPEDLFI 339
           QY A++L ED+FI
Sbjct: 514 QYVADQLHEDIFI 526



 Score = 32.7 bits (73), Expect(3) = 1e-11
 Identities = 14/28 (50%), Positives = 21/28 (75%)
 Frame = +3

Query: 66  YVLKADNVTDAYLIDVYEHIIDSKTIGQ 149
           Y L ADN+ DAYLIDV   I++ +++G+
Sbjct: 435 YGLAADNILDAYLIDVNGRILNRESMGE 462



 Score = 21.9 bits (45), Expect(3) = 1e-11
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 8   SAVCPGVSMGSQFSG 52
           + +CP V +G  FSG
Sbjct: 411 AGICPTVGVGGHFSG 425


>ref|XP_002523167.1| Reticuline oxidase precursor, putative [Ricinus communis]
           gi|223537574|gb|EEF39198.1| Reticuline oxidase
           precursor, putative [Ricinus communis]
          Length = 525

 Score = 57.8 bits (138), Expect(2) = 7e-11
 Identities = 34/73 (46%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 LLIAKPLGKDLYCTVRRWGEAIFGFV-S*NIKLVRVSSVGAFFIIHK*LRQGAPKLVH** 300
           +L  + +G+DL+  +R  G A FG + S  IKLVRVS +   F + K   QGA KL+H  
Sbjct: 208 ILDREAMGEDLFWAIRGGGGASFGVILSWKIKLVRVSPIVTVFTVPKTTEQGAIKLIHRW 267

Query: 301 QYAAEKLPEDLFI 339
           QY A+KL E+LFI
Sbjct: 268 QYVADKLDENLFI 280



 Score = 34.7 bits (78), Expect(2) = 7e-11
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +3

Query: 66  YVLKADNVTDAYLIDVYEHIIDSKTIGQ 149
           Y L ADNV DAYLIDV   I+D + +G+
Sbjct: 189 YGLAADNVIDAYLIDVNGRILDREAMGE 216


>ref|XP_002330615.1| predicted protein [Populus trichocarpa] gi|222872173|gb|EEF09304.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 56.2 bits (134), Expect(2) = 3e-10
 Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +1

Query: 124 LLIAKPLGKDLYCTVRRWGEAIFGFV-S*NIKLVRVSSVGAFFIIHK*LRQGAPKLVH** 300
           +L  + +G+DL+  +R  G A FG + S  IKL+RV      F + K + QGA KLVH  
Sbjct: 216 ILDRQGMGEDLFWAIRGGGGASFGIILSWKIKLIRVPPTVTVFTVPKTIEQGATKLVHRW 275

Query: 301 QYAAEKLPEDLFI 339
           QY A KL EDLFI
Sbjct: 276 QYIAGKLHEDLFI 288



 Score = 33.9 bits (76), Expect(2) = 3e-10
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +3

Query: 66  YVLKADNVTDAYLIDVYEHIIDSKTIGQ 149
           Y L ADNV DAYLIDV   I+D + +G+
Sbjct: 197 YGLAADNVIDAYLIDVNGRILDRQGMGE 224


>ref|XP_002523149.1| Reticuline oxidase precursor, putative [Ricinus communis]
           gi|223537556|gb|EEF39180.1| Reticuline oxidase
           precursor, putative [Ricinus communis]
          Length = 469

 Score = 49.3 bits (116), Expect(3) = 5e-08
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +1

Query: 142 LGKDLYCTVRRWGEAIFGFV-S*NIKLVRVSSVGAFFIIHK*LRQGAPKLVH**QYAAEK 318
           +G+DL+  +R  G   FG V S  I LV V +    F + K L+Q A +LV+  QY AEK
Sbjct: 155 MGEDLFWAIRGGGGNTFGIVISWKINLVPVPATVTVFTVEKTLKQNATQLVNGWQYIAEK 214

Query: 319 LPEDLFI 339
           L EDLFI
Sbjct: 215 LHEDLFI 221



 Score = 30.4 bits (67), Expect(3) = 5e-08
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 66  YVLKADNVTDAYLIDVYEHIIDSKTIGQ 149
           Y L ADN+ DA LIDV   ++D  ++G+
Sbjct: 130 YGLAADNIIDAVLIDVNGRVLDRASMGE 157



 Score = 22.3 bits (46), Expect(3) = 5e-08
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 11  AVCPGVSMGSQFSG 52
           +VCP V +G  FSG
Sbjct: 107 SVCPTVGIGGHFSG 120


>ref|XP_003638113.1| Reticuline oxidase [Medicago truncatula]
           gi|355504048|gb|AES85251.1| Reticuline oxidase [Medicago
           truncatula]
          Length = 543

 Score = 49.3 bits (116), Expect(3) = 6e-08
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +1

Query: 142 LGKDLYCTVRRWGEAIFG-FVS*NIKLVRVSSVGAFFIIHK*LRQGAPKLVH**QYAAEK 318
           +G+DL+  +R  G A FG  VS  IKLV+V S    F + + L Q A KLVH  Q+ A K
Sbjct: 221 MGEDLFWAIRGGGGASFGVIVSWKIKLVQVPSTVTVFTVPRTLEQNATKLVHKWQFVAHK 280

Query: 319 LPEDLFI 339
           L E+L I
Sbjct: 281 LEENLAI 287



 Score = 30.4 bits (67), Expect(3) = 6e-08
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 66  YVLKADNVTDAYLIDVYEHIIDSKTIGQ 149
           Y L ADNV DA++IDV    +D + +G+
Sbjct: 196 YGLAADNVIDAHIIDVKGRFLDREAMGE 223



 Score = 21.9 bits (45), Expect(3) = 6e-08
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 14  VCPGVSMGSQFSG 52
           VCP V +G  FSG
Sbjct: 174 VCPTVGVGGHFSG 186


Top