BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034165
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194257.1| pentatricopeptide repeat-containing protein [Ar...   100   9e-20
ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   100   1e-19
ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containi...   100   1e-19
ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arab...   100   1e-19
ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18

>ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g25270, chloroplastic; Flags: Precursor
           gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis
           thaliana] gi|7269378|emb|CAB81338.1| putative protein
           [Arabidopsis thaliana] gi|332659633|gb|AEE85033.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 527

 Score =  100 bits (250), Expect = 9e-20
 Identities = 46/60 (76%), Positives = 52/60 (86%)
 Frame = -3

Query: 375 VFDRMSDRNVYAFPWNSLISGYAEMGQFEDALALYFQMVEDGVEPDGFMFPRVLKACGGL 196
           VFDRMS R+   F WNSLISGYAE+GQ+EDA+ALYFQM EDGV+PD F FPRVLKACGG+
Sbjct: 149 VFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 208


>ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g25270, chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/60 (76%), Positives = 51/60 (85%)
 Frame = -3

Query: 375 VFDRMSDRNVYAFPWNSLISGYAEMGQFEDALALYFQMVEDGVEPDGFMFPRVLKACGGL 196
           VFD M +RN  AF WNSLISGYAE+G +EDALALYFQM E+GVEPD F FPRVLKACGG+
Sbjct: 111 VFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGI 170


>ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
           chloroplastic-like [Cucumis sativus]
          Length = 489

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/60 (76%), Positives = 51/60 (85%)
 Frame = -3

Query: 375 VFDRMSDRNVYAFPWNSLISGYAEMGQFEDALALYFQMVEDGVEPDGFMFPRVLKACGGL 196
           VFD M +RN  AF WNSLISGYAE+G +EDALALYFQM E+GVEPD F FPRVLKACGG+
Sbjct: 111 VFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKACGGI 170


>ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
           lyrata] gi|297313453|gb|EFH43876.1| hypothetical protein
           ARALYDRAFT_354257 [Arabidopsis lyrata subsp. lyrata]
          Length = 758

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/60 (76%), Positives = 51/60 (85%)
 Frame = -3

Query: 375 VFDRMSDRNVYAFPWNSLISGYAEMGQFEDALALYFQMVEDGVEPDGFMFPRVLKACGGL 196
           VFDRMS R    F WNSLISGYAE+GQ+EDA+ALYFQM EDGV+PD F FPRVLKACGG+
Sbjct: 380 VFDRMSKRESSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGI 439


>ref|XP_002322407.1| predicted protein [Populus trichocarpa] gi|222869403|gb|EEF06534.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 44/64 (68%), Positives = 51/64 (79%)
 Frame = -3

Query: 375 VFDRMSDRNVYAFPWNSLISGYAEMGQFEDALALYFQMVEDGVEPDGFMFPRVLKACGGL 196
           VFD M  R   AFPWNSLI+GY E G +EDA+ALYFQM E+GVEPD F FPRVLKACGG+
Sbjct: 66  VFDEMFKRGESAFPWNSLIAGYTESGLYEDAMALYFQMEEEGVEPDQFTFPRVLKACGGI 125

Query: 195 EILR 184
            ++R
Sbjct: 126 GLIR 129