BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034156
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatu...    85   5e-15
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    79   4e-13
ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus c...    79   5e-13
ref|XP_002515720.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold ...    74   2e-11

>ref|XP_003598202.1| 60S ribosomal protein L23 [Medicago truncatula]
           gi|355487250|gb|AES68453.1| 60S ribosomal protein L23
           [Medicago truncatula]
          Length = 547

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 47/162 (29%), Positives = 78/162 (48%)
 Frame = +3

Query: 9   NTLMQLSSRQISEWQEAQTKKQAQTPRTGNKETQTVTCWEKPEGEWSKLNVDASVFEGAA 188
           N  +QL+   + +WQ A+     Q  ++     Q    W+ P   + K NVDA++F    
Sbjct: 23  NIAVQLARELLFQWQAARNSATTQVQQS----PQDTIAWQPPAAGFLKCNVDAAIFSEQN 78

Query: 189 SFSIGMVLRDSNGEFIAGKNLRASGSVTVLEAEAIGVQEAVCWLEERRAQQVIIETDSLQ 368
            F  GM +RD  G F+        G     EAEA+G+++A+ WL +     V +E D   
Sbjct: 79  RFGTGMCVRDQRGRFLKAATNWYEGCPPPQEAEAVGLRDAILWLGQLELSNVQLELDCKL 138

Query: 369 VVKALNNNEVYLSEVGNTLDSCHSNLEHRGDLVVRHVKKQAN 494
           VV ++ +     +E G+ +D C S L+   +  +  V++QAN
Sbjct: 139 VVDSIYDKNNNQAEFGSIIDDCRSLLQQFTNFKISFVRRQAN 180


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/124 (33%), Positives = 66/124 (53%)
 Frame = +3

Query: 123  WEKPEGEWSKLNVDASVFEGAASFSIGMVLRDSNGEFIAGKNLRASGSVTVLEAEAIGVQ 302
            W+KP+  W K+NVD +VF    +  IG V RD  G F+ G              EA+GV+
Sbjct: 664  WQKPDYGWIKINVDGAVFPDKGA--IGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVR 721

Query: 303  EAVCWLEERRAQQVIIETDSLQVVKALNNNEVYLSEVGNTLDSCHSNLEHRGDLVVRHVK 482
            E + W+ ER   ++++ETD L+VV+A+ +     +  G  +  C   L+H  D+ V + +
Sbjct: 722  EVLSWIHERSRSRIVVETDCLRVVQAIQHKSCPNTSFGFIIVDCLDVLQHLVDVQVVYAR 781

Query: 483  KQAN 494
            + AN
Sbjct: 782  RSAN 785


>ref|XP_002531249.1| hypothetical protein RCOM_0494170 [Ricinus communis]
           gi|223529168|gb|EEF31146.1| hypothetical protein
           RCOM_0494170 [Ricinus communis]
          Length = 329

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
 Frame = +3

Query: 87  RTGNKET---QTVTCWEKPEGEWSKLNVDASVFEGAASFSIGMVLRDSNGEFIAGKNLRA 257
           R GN+     + +TC   P+  + K NVD +VF  +     GMV+RDS G F+ G +  +
Sbjct: 154 RNGNEARVMLEVLTCCP-PQPGFVKCNVDGAVFTASGRSGFGMVIRDSAGSFVMGADGSS 212

Query: 258 SGSVTVLEAEAIGVQEAVCWLEERRAQQVIIETDSLQVVKALNNNEVYLSEVGNTLDSCH 437
            G   V  AEAIG++EAV W+       VI E D+  VV A+ +    L E G  +  C 
Sbjct: 213 PGLFNVKLAEAIGLREAVQWVLSLGRSNVIFEYDAKVVVDAVLSGAADLFEFGAVIADCR 272

Query: 438 SNLEHRGDLVVRHVKKQAN 494
             L+H  +  V+ ++KQAN
Sbjct: 273 LLLQHGCNYSVQFIRKQAN 291


>ref|XP_002515720.1| conserved hypothetical protein [Ricinus communis]
           gi|223545157|gb|EEF46667.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/103 (35%), Positives = 60/103 (58%)
 Frame = +3

Query: 126 EKPEGEWSKLNVDASVFEGAASFSIGMVLRDSNGEFIAGKNLRASGSVTVLEAEAIGVQE 305
           +KP   W K ++DA+ FE      IG++  D  G F+ GK+   +G + + EAEA+G++E
Sbjct: 37  QKPARGWVKCDMDAATFENGRVIGIGLMSMDEEGRFVKGKSFCMNGRIAIKEAEAMGLKE 96

Query: 306 AVCWLEERRAQQVIIETDSLQVVKALNNNEVYLSEVGNTLDSC 434
           A+ W  E+  Q+VI E+D+  V+ A +     LSE G+ +  C
Sbjct: 97  ALSWCLEQGLQRVIFESDAKVVMGAFHYRPEELSEFGSIIAEC 139


>gb|ABN06159.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 266

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
 Frame = +3

Query: 3   APNTLMQLSSRQISEWQEAQTKKQAQTP----RTGNKETQTVTCWEKPEGEWSKLNVDAS 170
           A  T   +    +  WQ+ Q   +  +P       N+     + WEKP   W K NVDA 
Sbjct: 64  AHRTSTSIGRTTLEAWQQWQEVHKQHSPPVVQHMHNRVQGNNSVWEKPSETWLKCNVDAV 123

Query: 171 VFEGAASFSIGMVLRDSNGEFIAGKNLRASGSVTVLEAEAIGVQEAVCWLEERRAQQVII 350
             +     S    +RDS G+FI  +      ++TVLE EA+ + EA+   +  R  +V+ 
Sbjct: 124 FHDRNHITSFACCVRDSRGQFIRAQTKWQRANMTVLEGEAVALLEAIHSADANRWNRVVF 183

Query: 351 ETDSLQVVKALNNNEVYLSEVGNTLDSCHSNLEHRGDLVVRHVKKQAN 494
           E+DS  +V+AL++     SE    + S    L    +  V+ V++QAN
Sbjct: 184 ESDSSTLVQALSSPGHGDSEFSAIVSSIIYQLSLHSNFEVKFVRRQAN 231