BLASTX nr result

ID: Bupleurum21_contig00034155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034155
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302590.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_003528850.1| PREDICTED: SKP1-like protein 21-like [Glycin...    58   9e-07
ref|XP_003520975.1| PREDICTED: SKP1-like protein 21-like [Glycin...    58   9e-07
ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus ...    58   9e-07
ref|XP_002320801.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002302590.1| predicted protein [Populus trichocarpa] gi|222844316|gb|EEE81863.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +2

Query: 2   RTNKEHKSFDVKLLRKNADNLIALVGAARYLQLVDLTDQICQAIAEQLADGPSEKLHEFF 181
           R+NKE KSFD K +R +   L  L  AA  LQL  L D   +A+A  +     E++ E F
Sbjct: 84  RSNKERKSFDEKFVRMDTKRLCELTSAAESLQLKPLVDLTSRALARIIEGKTPEEIREIF 143

Query: 182 NHQKEETLRELRADRKMST---RMRLLNKFYGKNKKGAEDK 295
           +   + T  E     K +T   R+RLLN+ Y K +K  +++
Sbjct: 144 HLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKER 184


>ref|XP_003528850.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RTNKEHKSFDVKLLRKNADNLIALVGAARYLQLVDLTDQICQAIAEQLADGPSEKLHEFF 181
           R+NKE KS+D K +R + + L  L  AA  LQL  L D   +A+A  +     E++ + F
Sbjct: 84  RSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIF 143

Query: 182 N-------HQKEETLRELRADRKMSTRMRLLNKFYGKNKKGAEDK 295
           +        +K E LR + AD     R+RLLN+ Y K +K  +++
Sbjct: 144 HLPDDLTEEEKLEPLRNITAD----PRIRLLNRLYAKKRKELKER 184


>ref|XP_003520975.1| PREDICTED: SKP1-like protein 21-like [Glycine max]
          Length = 347

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 7/105 (6%)
 Frame = +2

Query: 2   RTNKEHKSFDVKLLRKNADNLIALVGAARYLQLVDLTDQICQAIAEQLADGPSEKLHEFF 181
           R+NKE KS+D K +R + + L  L  AA  LQL  L D   +A+A  +     E++ + F
Sbjct: 84  RSNKERKSYDEKFVRIDTERLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRDIF 143

Query: 182 N-------HQKEETLRELRADRKMSTRMRLLNKFYGKNKKGAEDK 295
           +        +K E LR + AD     R+RLLN+ Y K +K  +++
Sbjct: 144 HLPDDLTEEEKLEPLRNITAD----PRIRLLNRLYAKKRKELKER 184


>ref|XP_002511871.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223549051|gb|EEF50540.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 359

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +2

Query: 2   RTNKEHKSFDVKLLRKNADNLIALVGAARYLQLVDLTDQICQAIAEQLADGPSEKLHEFF 181
           R+NKE KSFD K +R +   L  L  AA  LQL  L D   +A+A  +     E++ E F
Sbjct: 76  RSNKERKSFDEKFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIF 135

Query: 182 NHQKEETLRELRADRKMST---RMRLLNKFYGKNKKGAEDK 295
           +   + T  E     K +T   R+RLLN+ Y K +K  +++
Sbjct: 136 HLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKER 176


>ref|XP_002320801.1| predicted protein [Populus trichocarpa] gi|222861574|gb|EEE99116.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
 Frame = +2

Query: 2   RTNKEHKSFDVKLLRKNADNLIALVGAARYLQLVDLTDQICQAIAEQLADGPSEKLHEFF 181
           R+NKE KSFD K +R +   L  L  AA  LQL  L D   +A+A  +     E++ E F
Sbjct: 84  RSNKERKSFDEKFVRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIREIF 143

Query: 182 NHQKEETLRELRADRKMST---RMRLLNKFYGKNKKGAEDK 295
           +   + T  E     K +T   R+RLLN+ Y K +K  +++
Sbjct: 144 HLPDDLTEEEKLEPLKNTTDDPRIRLLNRLYAKKRKELKER 184


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