BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034141
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_740175.1| hypothetical protein RF1 [Daucus carota] gi|118...   164   5e-39
ref|YP_004222704.1| hypothetical chloroplast RF19 [Anthriscus ce...   161   4e-38
ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus ...   141   6e-32
ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68...   135   3e-30
gb|ADD30903.1| putative RF1 protein [Aucuba japonica]                 126   2e-27

>ref|YP_740175.1| hypothetical protein RF1 [Daucus carota]
           gi|118574747|sp|Q0G9Q4.1|YCF1_DAUCA RecName:
           Full=Putative membrane protein ycf1
           gi|113200966|gb|ABI32482.1| hypothetical protein RF1
           [Daucus carota]
          Length = 1826

 Score =  164 bits (416), Expect = 5e-39
 Identities = 81/102 (79%), Positives = 82/102 (80%)
 Frame = +1

Query: 1   IFTKKLNPQTXXXXXXXXXXXXXXXXXXXTKGTKEEQEGSTEEDPSPSLFSEEKEDPDKI 180
           IFTKKLNPQT                   TKGTK+EQEGSTEEDPSPSLFSEEKEDPDKI
Sbjct: 241 IFTKKLNPQTEEGWESEEETDVEIETASETKGTKQEQEGSTEEDPSPSLFSEEKEDPDKI 300

Query: 181 DETEEIRVNGKEKTKDEFHFTETRYNNSPVYKGLFWFEKPLL 306
           DETEEIRVNGKEKTKDEFHFTE RYNNSPVYKGLFWFEKPLL
Sbjct: 301 DETEEIRVNGKEKTKDEFHFTEIRYNNSPVYKGLFWFEKPLL 342


>ref|YP_004222704.1| hypothetical chloroplast RF19 [Anthriscus cerefolium]
           gi|289645633|gb|ADD13696.1| hypothetical chloroplast
           RF19 [Anthriscus cerefolium]
          Length = 1793

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/102 (79%), Positives = 82/102 (80%)
 Frame = +1

Query: 1   IFTKKLNPQTXXXXXXXXXXXXXXXXXXXTKGTKEEQEGSTEEDPSPSLFSEEKEDPDKI 180
           IFTKKLNPQT                   TKGTK+EQEGSTEEDPSPSLFSEEKEDPDKI
Sbjct: 238 IFTKKLNPQTEEGWESEEETDVEIETASETKGTKQEQEGSTEEDPSPSLFSEEKEDPDKI 297

Query: 181 DETEEIRVNGKEKTKDEFHFTETRYNNSPVYKGLFWFEKPLL 306
           DETEEIRVNGKEKTKDEFHFTETRYNNSPVYKGLF FEKPLL
Sbjct: 298 DETEEIRVNGKEKTKDEFHFTETRYNNSPVYKGLFRFEKPLL 339


>ref|YP_004935611.1| ycf1 protein (chloroplast) [Eleutherococcus senticosus]
           gi|347448265|gb|AEO92677.1| ycf1 protein (chloroplast)
           [Eleutherococcus senticosus]
          Length = 1875

 Score =  141 bits (355), Expect = 6e-32
 Identities = 78/128 (60%), Positives = 81/128 (63%), Gaps = 26/128 (20%)
 Frame = +1

Query: 1   IFTKKLN--PQTXXXXXXXXXXXXXXXXXXXTKGTKEEQEGSTEEDPSPSLFSEEKEDPD 174
           IFTKKL   P+T                   TKGTK+EQEGSTEEDPSPSLFSEEKEDPD
Sbjct: 244 IFTKKLKETPKTEERGESEEETDVEIETASETKGTKQEQEGSTEEDPSPSLFSEEKEDPD 303

Query: 175 KIDETEEIRVNGKEKTKDEFHFTETRYNNSPVY------------------------KGL 282
           KIDETEEIRVNGKEKTKDEFHFTET YNNSPVY                        KGL
Sbjct: 304 KIDETEEIRVNGKEKTKDEFHFTETSYNNSPVYKVSYLYKNQENFNKIKILDKKDEDKGL 363

Query: 283 FWFEKPLL 306
           FWFEKPL+
Sbjct: 364 FWFEKPLV 371


>ref|YP_087024.1| ycf1 protein [Panax ginseng] gi|75117190|sp|Q68RU8.1|YCF1_PANGI
           RecName: Full=Putative membrane protein ycf1
           gi|51235372|gb|AAT98568.1| ycf1 protein [Panax ginseng]
          Length = 1919

 Score =  135 bits (340), Expect = 3e-30
 Identities = 69/97 (71%), Positives = 71/97 (73%), Gaps = 24/97 (24%)
 Frame = +1

Query: 88  TKGTKEEQEGSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFTETRYNNSP 267
           TKG K+EQEGSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFTET YNNSP
Sbjct: 332 TKGAKQEQEGSTEEDPSPSLFSEEKEDPDKIDETEEIRVNGKEKTKDEFHFTETSYNNSP 391

Query: 268 VY------------------------KGLFWFEKPLL 306
           VY                        KGLFWFEKPL+
Sbjct: 392 VYKVSYLYKNQENFNKIKILDKKDEDKGLFWFEKPLV 428


>gb|ADD30903.1| putative RF1 protein [Aucuba japonica]
          Length = 1890

 Score =  126 bits (317), Expect = 2e-27
 Identities = 74/126 (58%), Positives = 77/126 (61%), Gaps = 24/126 (19%)
 Frame = +1

Query: 1   IFTKKLNP--QTXXXXXXXXXXXXXXXXXXXTKGTKEEQEGSTEEDPSPSLFSEEKEDPD 174
           IFTKKL    +T                   TKGTK+EQEG TEEDPSPSLFSEEKEDPD
Sbjct: 244 IFTKKLKETSKTEEKGESEEETDVEIETASETKGTKQEQEGYTEEDPSPSLFSEEKEDPD 303

Query: 175 KIDETEEIRVNGKEKTKDE--FHFTETRYNNSPVY--------------------KGLFW 288
           KIDETEEIRVNGKEKTKDE  FHFTET YNNSPVY                    K  FW
Sbjct: 304 KIDETEEIRVNGKEKTKDEFHFHFTETCYNNSPVYEVSYLDRNQENLKFDKHDEKKDRFW 363

Query: 289 FEKPLL 306
           FEKPL+
Sbjct: 364 FEKPLV 369