BLASTX nr result

ID: Bupleurum21_contig00034109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00034109
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2...   137   9e-31
emb|CBI33681.3| unnamed protein product [Vitis vinifera]              137   9e-31
dbj|BAH80549.1| transcription factor GRAS family protein [Eucaly...   137   9e-31
ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1...   137   9e-31
emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]   137   9e-31

>ref|XP_003632486.1| PREDICTED: protein SHORT-ROOT-like isoform 2 [Vitis vinifera]
          Length = 509

 Score =  137 bits (346), Expect = 9e-31
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = -3

Query: 562 ERLVLERSAGRAVMDLVACPMYESTERRETANQWSLRLRATGFSDVVFSNEVKEDIGALL 383
           ERL+LER+AGRA++DLVACP  ES ERRETA +WS RL A+GFS V FS+EV +D+ ALL
Sbjct: 416 ERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALL 475

Query: 382 RRYKDGWTTRVCSDAGMFLVWKDQPVVWASAWK 284
           RRYK+GW+    SDAG+FL WKDQPVVW SAWK
Sbjct: 476 RRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWK 508


>emb|CBI33681.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  137 bits (346), Expect = 9e-31
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = -3

Query: 562 ERLVLERSAGRAVMDLVACPMYESTERRETANQWSLRLRATGFSDVVFSNEVKEDIGALL 383
           ERL+LER+AGRA++DLVACP  ES ERRETA +WS RL A+GFS V FS+EV +D+ ALL
Sbjct: 326 ERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALL 385

Query: 382 RRYKDGWTTRVCSDAGMFLVWKDQPVVWASAWK 284
           RRYK+GW+    SDAG+FL WKDQPVVW SAWK
Sbjct: 386 RRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWK 418


>dbj|BAH80549.1| transcription factor GRAS family protein [Eucalyptus grandis]
          Length = 494

 Score =  137 bits (346), Expect = 9e-31
 Identities = 63/93 (67%), Positives = 76/93 (81%)
 Frame = -3

Query: 562 ERLVLERSAGRAVMDLVACPMYESTERRETANQWSLRLRATGFSDVVFSNEVKEDIGALL 383
           ERL+LER AGRAVMDLVACP + S ERRE A++WS RLR  GF+  +FS+EV +D+ ALL
Sbjct: 401 ERLMLERGAGRAVMDLVACPPHHSVERREPASRWSRRLRGGGFNPCLFSDEVCDDVRALL 460

Query: 382 RRYKDGWTTRVCSDAGMFLVWKDQPVVWASAWK 284
           RRYK+GW+   C DAG+FL WKDQPVVWASAW+
Sbjct: 461 RRYKEGWSMTPCPDAGIFLTWKDQPVVWASAWR 493


>ref|XP_002267068.1| PREDICTED: protein SHORT-ROOT-like isoform 1 [Vitis vinifera]
          Length = 494

 Score =  137 bits (346), Expect = 9e-31
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = -3

Query: 562 ERLVLERSAGRAVMDLVACPMYESTERRETANQWSLRLRATGFSDVVFSNEVKEDIGALL 383
           ERL+LER+AGRA++DLVACP  ES ERRETA +WS RL A+GFS V FS+EV +D+ ALL
Sbjct: 401 ERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALL 460

Query: 382 RRYKDGWTTRVCSDAGMFLVWKDQPVVWASAWK 284
           RRYK+GW+    SDAG+FL WKDQPVVW SAWK
Sbjct: 461 RRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWK 493


>emb|CAN75901.1| hypothetical protein VITISV_001968 [Vitis vinifera]
          Length = 480

 Score =  137 bits (346), Expect = 9e-31
 Identities = 65/93 (69%), Positives = 77/93 (82%)
 Frame = -3

Query: 562 ERLVLERSAGRAVMDLVACPMYESTERRETANQWSLRLRATGFSDVVFSNEVKEDIGALL 383
           ERL+LER+AGRA++DLVACP  ES ERRETA +WS RL A+GFS V FS+EV +D+ ALL
Sbjct: 387 ERLMLERAAGRAIVDLVACPPSESIERRETATRWSQRLHASGFSPVSFSDEVCDDVRALL 446

Query: 382 RRYKDGWTTRVCSDAGMFLVWKDQPVVWASAWK 284
           RRYK+GW+    SDAG+FL WKDQPVVW SAWK
Sbjct: 447 RRYKEGWSMTQSSDAGIFLSWKDQPVVWTSAWK 479


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